Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MIR6821-201ENST00000617625 74 ntBASIC21.94■■□□□ 1.1
CCDC187A0A096LP49 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC187A0A096LP49 RASA4CP-201ENST00000424092 1398 ntBASIC21.94■■□□□ 1.1
CCDC187A0A096LP49 AC131274.2-201ENST00000580697 1507 ntBASIC21.94■■□□□ 1.1
CCDC187A0A096LP49 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC187A0A096LP49 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCDC187A0A096LP49 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CCDC187A0A096LP49 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CCDC187A0A096LP49 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC187A0A096LP49 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC187A0A096LP49 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC187A0A096LP49 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.93■■□□□ 1.1
CCDC187A0A096LP49 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC187A0A096LP49 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC187A0A096LP49 AC027682.1-201ENST00000562846 899 ntBASIC21.93■■□□□ 1.1
CCDC187A0A096LP49 AC099791.2-201ENST00000605725 427 ntBASIC21.93■■□□□ 1.1
CCDC187A0A096LP49 AL138724.1-201ENST00000606771 1088 ntBASIC21.93■■□□□ 1.1
CCDC187A0A096LP49 AC011298.3-201ENST00000615796 283 ntBASIC21.93■■□□□ 1.1
CCDC187A0A096LP49 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC187A0A096LP49 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC187A0A096LP49 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CCDC187A0A096LP49 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC187A0A096LP49 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CCDC187A0A096LP49 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC187A0A096LP49 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC187A0A096LP49 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC187A0A096LP49 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC187A0A096LP49 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.92■■□□□ 1.1
CCDC187A0A096LP49 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.92■■□□□ 1.1
CCDC187A0A096LP49 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC187A0A096LP49 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC187A0A096LP49 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCDC187A0A096LP49 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC187A0A096LP49 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC187A0A096LP49 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CCDC187A0A096LP49 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC187A0A096LP49 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC187A0A096LP49 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC187A0A096LP49 AC097381.1-201ENST00000429019 1296 ntBASIC21.91■■□□□ 1.1
CCDC187A0A096LP49 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC187A0A096LP49 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC187A0A096LP49 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC187A0A096LP49 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCDC187A0A096LP49 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC187A0A096LP49 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC187A0A096LP49 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC187A0A096LP49 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC187A0A096LP49 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC187A0A096LP49 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC187A0A096LP49 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC187A0A096LP49 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC187A0A096LP49 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC187A0A096LP49 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC187A0A096LP49 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
CCDC187A0A096LP49 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
CCDC187A0A096LP49 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC187A0A096LP49 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC187A0A096LP49 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CCDC187A0A096LP49 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC187A0A096LP49 AL121749.1-202ENST00000609313 2153 ntBASIC21.89■■□□□ 1.09
CCDC187A0A096LP49 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC187A0A096LP49 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC187A0A096LP49 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CCDC187A0A096LP49 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC187A0A096LP49 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC187A0A096LP49 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC187A0A096LP49 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.88■■□□□ 1.09
CCDC187A0A096LP49 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC187A0A096LP49 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC187A0A096LP49 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.88■■□□□ 1.09
CCDC187A0A096LP49 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC187A0A096LP49 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC187A0A096LP49 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC187A0A096LP49 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC187A0A096LP49 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC187A0A096LP49 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC187A0A096LP49 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC187A0A096LP49 AC008764.7-201ENST00000593779 1081 ntBASIC21.87■■□□□ 1.09
CCDC187A0A096LP49 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC187A0A096LP49 AC009102.2-201ENST00000606772 1639 ntBASIC21.87■■□□□ 1.09
CCDC187A0A096LP49 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CCDC187A0A096LP49 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC187A0A096LP49 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC187A0A096LP49 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC187A0A096LP49 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.86■■□□□ 1.09
CCDC187A0A096LP49 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC187A0A096LP49 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.86■■□□□ 1.09
CCDC187A0A096LP49 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC187A0A096LP49 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC187A0A096LP49 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC187A0A096LP49 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC187A0A096LP49 AL022069.1-201ENST00000568025 1636 ntBASIC21.85■■□□□ 1.09
CCDC187A0A096LP49 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC187A0A096LP49 AC241377.3-202ENST00000626088 1088 ntBASIC21.85■■□□□ 1.09
CCDC187A0A096LP49 AC241585.3-202ENST00000628937 1088 ntBASIC21.85■■□□□ 1.09
CCDC187A0A096LP49 AC245100.8-202ENST00000629247 1058 ntBASIC21.85■■□□□ 1.09
CCDC187A0A096LP49 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC187A0A096LP49 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC187A0A096LP49 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC187A0A096LP49 AC092803.2-201ENST00000564287 1899 ntBASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms