Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 AC135731.1-201ENST00000569415 2548 ntBASIC22.48■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.47■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.47■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 MIR4466-201ENST00000606121 54 ntBASIC22.47■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 HLA-L-211ENST00000482052 1765 ntBASIC22.47■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
TRBV23OR9-2A0A075B6M9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.45■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.45■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.44■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.44■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.43■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.43■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.43■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.42■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.42■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.42■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 AL022069.1-201ENST00000568025 1636 ntBASIC22.42■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 AC020928.2-201ENST00000588717 2197 ntBASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 AL512631.2-201ENST00000604634 923 ntBASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.4■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.4■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.4■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.4■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.4■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 AC138932.3-201ENST00000567634 1902 ntBASIC22.39■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.39■■□□□ 1.18
TRBV23OR9-2A0A075B6M9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRBV23OR9-2A0A075B6M9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms