Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
LINC01558Q9Y6Z2 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 AC092028.1-202ENST00000641483 3547 ntBASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 AC092028.1-201ENST00000641781 3540 ntBASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 EGLN3-205ENST00000547327 2849 ntBASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 COIL-201ENST00000240316 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 NIFKP9-201ENST00000419265 221 ntBASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 AC007967.3-201ENST00000434308 558 ntBASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 AC123595.1-201ENST00000440769 1046 ntBASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 UNC93B4-201ENST00000505679 747 ntBASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 AC026271.3-201ENST00000571884 352 ntBASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 AC008687.6-201ENST00000596318 630 ntBASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 ABBA01031674.1-201ENST00000635145 728 ntBASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 FGF11-202ENST00000572907 2358 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LINC01558Q9Y6Z2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms