Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 HSPA7-201ENST00000445535 1927 ntBASIC17.24■□□□□ 0.35
CLIC4Q9Y696 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 AL442647.2-201ENST00000429864 857 ntBASIC17.24■□□□□ 0.35
CLIC4Q9Y696 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 AC007541.1-201ENST00000570282 1469 ntBASIC17.24■□□□□ 0.35
CLIC4Q9Y696 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.24■□□□□ 0.35
CLIC4Q9Y696 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 MIR770-201ENST00000390219 98 ntBASIC17.23■□□□□ 0.35
CLIC4Q9Y696 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 DFFBP1-201ENST00000433250 979 ntBASIC17.23■□□□□ 0.35
CLIC4Q9Y696 EIF3FP3-201ENST00000434851 1086 ntBASIC17.23■□□□□ 0.35
CLIC4Q9Y696 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 AL132655.2-201ENST00000596276 594 ntBASIC17.23■□□□□ 0.35
CLIC4Q9Y696 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.23■□□□□ 0.35
CLIC4Q9Y696 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 PCDHA3-202ENST00000532566 4594 ntBASIC17.22■□□□□ 0.35
CLIC4Q9Y696 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 KLF2P2-201ENST00000416807 1039 ntBASIC17.22■□□□□ 0.35
CLIC4Q9Y696 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 TSPY16P-201ENST00000449843 468 ntBASIC17.22■□□□□ 0.35
CLIC4Q9Y696 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLIC4Q9Y696 AC005252.2-201ENST00000624630 1141 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms