Protein–RNA interactions for Protein: Q9Y5L0

TNPO3, Transportin-3, humanhuman

Known RBP Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3Q9Y5L0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 AC134915.1-201ENST00000426461 574 ntBASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 AC007431.3-201ENST00000623221 587 ntBASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNPO3Q9Y5L0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 INTS4P2-202ENST00000614726 2019 ntBASIC14.77□□□□□ -0.04
TNPO3Q9Y5L0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 AC055876.2-201ENST00000531834 546 ntBASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 AL603764.1-201ENST00000636452 321 ntBASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
TNPO3Q9Y5L0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNPO3Q9Y5L0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.76□□□□□ -0.05
TNPO3Q9Y5L0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNPO3Q9Y5L0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNPO3Q9Y5L0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNPO3Q9Y5L0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TNPO3Q9Y5L0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
TNPO3Q9Y5L0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNPO3Q9Y5L0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TNPO3Q9Y5L0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.76□□□□□ -0.05
TNPO3Q9Y5L0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms