Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 AC007191.1-201ENST00000623179 2995 ntBASIC14.2□□□□□ -0.14
CNIH4Q9P003 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 AC009486.1-201ENST00000569860 813 ntBASIC14.2□□□□□ -0.14
CNIH4Q9P003 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 AC010319.3-201ENST00000597028 470 ntBASIC14.2□□□□□ -0.14
CNIH4Q9P003 AC025181.2-201ENST00000606994 802 ntBASIC14.2□□□□□ -0.14
CNIH4Q9P003 AC107373.2-201ENST00000607735 490 ntBASIC14.2□□□□□ -0.14
CNIH4Q9P003 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 AL645728.2-202ENST00000641679 227 ntBASIC14.2□□□□□ -0.14
CNIH4Q9P003 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 WASH3P-207ENST00000560956 1394 ntBASIC14.2□□□□□ -0.14
CNIH4Q9P003 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNIH4Q9P003 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CNIH4Q9P003 CICP14-201ENST00000629111 2732 ntBASIC14.2□□□□□ -0.14
CNIH4Q9P003 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 AC005089.1-201ENST00000619486 2241 ntBASIC14.19□□□□□ -0.14
CNIH4Q9P003 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 GAPDHP40-201ENST00000505218 1006 ntBASIC14.19□□□□□ -0.14
CNIH4Q9P003 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 AP001063.1-201ENST00000568332 529 ntBASIC14.19□□□□□ -0.14
CNIH4Q9P003 AC106886.1-201ENST00000568660 600 ntBASIC14.19□□□□□ -0.14
CNIH4Q9P003 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 ACE3P-201ENST00000423435 1973 ntBASIC14.19□□□□□ -0.14
CNIH4Q9P003 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.19□□□□□ -0.14
CNIH4Q9P003 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNIH4Q9P003 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms