Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 MIR6787-201ENST00000616675 61 ntBASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 PRSS30P-206ENST00000641773 873 ntBASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.69□□□□□ -0.06
CUEDC1Q9NWM3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 AL645937.2-201ENST00000396808 931 ntBASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 AL139094.1-201ENST00000405549 1188 ntBASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 AC004945.1-201ENST00000416738 983 ntBASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 NUS1P3-201ENST00000423502 862 ntBASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 ACTG1P3-201ENST00000431775 1114 ntBASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 ACTBP11-201ENST00000436287 1126 ntBASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 AC007389.4-201ENST00000454674 793 ntBASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 AC090142.2-201ENST00000483263 416 ntBASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 AKR1B10P2-201ENST00000577332 927 ntBASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.68□□□□□ -0.06
CUEDC1Q9NWM3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CUEDC1Q9NWM3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms