Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 BTBD7P1-201ENST00000447253 1453 ntBASIC14.06□□□□□ -0.16
POLR2J2Q9GZM3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 KRT18P13-201ENST00000400056 1290 ntBASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
POLR2J2Q9GZM3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 AC079781.5-202ENST00000641784 3743 ntBASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 AL139400.1-201ENST00000366220 510 ntBASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 AL645937.2-201ENST00000396808 931 ntBASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 AC107890.1-201ENST00000422478 521 ntBASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 AC114501.2-201ENST00000439631 535 ntBASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 AC027369.6-201ENST00000525520 931 ntBASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
POLR2J2Q9GZM3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms