Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDNQ99608 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDNQ99608 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDNQ99608 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NDNQ99608 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.26■□□□□ 0.03
NDNQ99608 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NDNQ99608 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NDNQ99608 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDNQ99608 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.26■□□□□ 0.03
NDNQ99608 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
NDNQ99608 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.25■□□□□ 0.03
NDNQ99608 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NDNQ99608 CICP17-201ENST00000418553 2377 ntBASIC15.25■□□□□ 0.03
NDNQ99608 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.25■□□□□ 0.03
NDNQ99608 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NDNQ99608 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
NDNQ99608 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.25■□□□□ 0.03
NDNQ99608 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.25■□□□□ 0.03
NDNQ99608 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.25■□□□□ 0.03
NDNQ99608 AC093214.1-201ENST00000511688 1107 ntBASIC15.25■□□□□ 0.03
NDNQ99608 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.25■□□□□ 0.03
NDNQ99608 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.25■□□□□ 0.03
NDNQ99608 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
NDNQ99608 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.25■□□□□ 0.03
NDNQ99608 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.25■□□□□ 0.03
NDNQ99608 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.25■□□□□ 0.03
NDNQ99608 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.25■□□□□ 0.03
NDNQ99608 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.25■□□□□ 0.03
NDNQ99608 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NDNQ99608 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.25■□□□□ 0.03
NDNQ99608 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.25■□□□□ 0.03
NDNQ99608 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NDNQ99608 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 AC018529.2-202ENST00000611482 3087 ntBASIC15.25■□□□□ 0.03
NDNQ99608 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
NDNQ99608 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDNQ99608 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.24■□□□□ 0.03
NDNQ99608 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.24■□□□□ 0.03
NDNQ99608 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NDNQ99608 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 AL157414.3-201ENST00000624276 1954 ntBASIC15.24■□□□□ 0.03
NDNQ99608 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.24■□□□□ 0.03
NDNQ99608 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 MRPS18AP1-201ENST00000414458 589 ntBASIC15.24■□□□□ 0.03
NDNQ99608 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.24■□□□□ 0.03
NDNQ99608 AL512638.1-201ENST00000457493 794 ntBASIC15.24■□□□□ 0.03
NDNQ99608 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.24■□□□□ 0.03
NDNQ99608 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.24■□□□□ 0.03
NDNQ99608 SAMD11P1-201ENST00000571429 661 ntBASIC15.24■□□□□ 0.03
NDNQ99608 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.24■□□□□ 0.03
NDNQ99608 AC005498.2-205ENST00000593218 784 ntBASIC15.24■□□□□ 0.03
NDNQ99608 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.24■□□□□ 0.03
NDNQ99608 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.24■□□□□ 0.03
NDNQ99608 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NDNQ99608 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
NDNQ99608 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 MTHFR-210ENST00000641407 2387 ntBASIC15.24■□□□□ 0.03
NDNQ99608 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
NDNQ99608 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NDNQ99608 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
NDNQ99608 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDNQ99608 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms