Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 AC093525.8-201ENST00000624099 1342 ntBASIC11.1□□□□□ -0.63
MUC4Q99102 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
MUC4Q99102 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
MUC4Q99102 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.1□□□□□ -0.63
MUC4Q99102 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
MUC4Q99102 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 BANP-203ENST00000393207 2438 ntTSL 2 BASIC11.1□□□□□ -0.63
MUC4Q99102 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
MUC4Q99102 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 FER1L4-210ENST00000615531 5998 ntBASIC11.1□□□□□ -0.63
MUC4Q99102 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
MUC4Q99102 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
MUC4Q99102 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
MUC4Q99102 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
MUC4Q99102 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.1□□□□□ -0.63
MUC4Q99102 AC114501.2-201ENST00000439631 535 ntBASIC11.1□□□□□ -0.63
MUC4Q99102 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.1□□□□□ -0.63
MUC4Q99102 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.1□□□□□ -0.63
MUC4Q99102 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
MUC4Q99102 AL391069.4-201ENST00000609583 481 ntBASIC11.1□□□□□ -0.63
MUC4Q99102 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
MUC4Q99102 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
MUC4Q99102 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
MUC4Q99102 AL157414.3-201ENST00000624276 1954 ntBASIC11.1□□□□□ -0.63
MUC4Q99102 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.1□□□□□ -0.63
MUC4Q99102 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MUC4Q99102 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
MUC4Q99102 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.09□□□□□ -0.63
MUC4Q99102 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.09□□□□□ -0.63
MUC4Q99102 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.09□□□□□ -0.63
MUC4Q99102 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC11.09□□□□□ -0.63
MUC4Q99102 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 SDHAP3-202ENST00000515467 728 ntBASIC11.09□□□□□ -0.63
MUC4Q99102 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.09□□□□□ -0.63
MUC4Q99102 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.09□□□□□ -0.63
MUC4Q99102 AC104794.3-201ENST00000566840 1248 ntBASIC11.09□□□□□ -0.63
MUC4Q99102 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.09□□□□□ -0.63
MUC4Q99102 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
MUC4Q99102 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 HSPA7-201ENST00000445535 1927 ntBASIC11.09□□□□□ -0.63
MUC4Q99102 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
MUC4Q99102 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.09□□□□□ -0.63
MUC4Q99102 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
MUC4Q99102 GRK6P1-201ENST00000400595 1711 ntBASIC11.09□□□□□ -0.63
MUC4Q99102 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
MUC4Q99102 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.09□□□□□ -0.63
MUC4Q99102 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
MUC4Q99102 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MUC4Q99102 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
MUC4Q99102 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms