Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM54Q969K7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM54Q969K7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
TMEM54Q969K7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
TMEM54Q969K7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM54Q969K7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM54Q969K7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM54Q969K7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
TMEM54Q969K7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM54Q969K7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM54Q969K7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
TMEM54Q969K7 AC003102.2-201ENST00000589195 1469 ntBASIC13.29□□□□□ -0.28
TMEM54Q969K7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM54Q969K7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TMEM54Q969K7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM54Q969K7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 AC140479.7-201ENST00000636301 2332 ntBASIC13.28□□□□□ -0.28
TMEM54Q969K7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 AC092933.1-201ENST00000393644 945 ntBASIC13.28□□□□□ -0.28
TMEM54Q969K7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 AC025279.2-201ENST00000569730 653 ntBASIC13.28□□□□□ -0.28
TMEM54Q969K7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 AC233724.13-201ENST00000598383 410 ntBASIC13.28□□□□□ -0.28
TMEM54Q969K7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 AC132938.4-201ENST00000623835 848 ntBASIC13.28□□□□□ -0.28
TMEM54Q969K7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 LINC00552-201ENST00000625151 2579 ntBASIC13.28□□□□□ -0.28
TMEM54Q969K7 AL138725.1-201ENST00000407347 1314 ntBASIC13.28□□□□□ -0.28
TMEM54Q969K7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 CLUHP2-201ENST00000426660 1303 ntBASIC13.28□□□□□ -0.28
TMEM54Q969K7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM54Q969K7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM54Q969K7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM54Q969K7 SALL4P5-201ENST00000419001 1760 ntBASIC13.27□□□□□ -0.28
TMEM54Q969K7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
TMEM54Q969K7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM54Q969K7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.27□□□□□ -0.28
TMEM54Q969K7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM54Q969K7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM54Q969K7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM54Q969K7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM54Q969K7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM54Q969K7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
TMEM54Q969K7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM54Q969K7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM54Q969K7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM54Q969K7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 TMEM14DP-201ENST00000422205 345 ntBASIC13.27□□□□□ -0.29
TMEM54Q969K7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM54Q969K7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 BTNL10-201ENST00000595971 695 ntBASIC13.27□□□□□ -0.29
TMEM54Q969K7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 AL022328.1-201ENST00000610050 478 ntBASIC13.27□□□□□ -0.29
TMEM54Q969K7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM54Q969K7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms