Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 AC093512.1-201ENST00000617969 520 ntBASIC13.64□□□□□ -0.23
PTP4A1Q93096 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 AC100757.3-201ENST00000622361 1406 ntBASIC13.64□□□□□ -0.23
PTP4A1Q93096 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.63□□□□□ -0.23
PTP4A1Q93096 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.63□□□□□ -0.23
PTP4A1Q93096 AC004066.1-201ENST00000502488 802 ntBASIC13.63□□□□□ -0.23
PTP4A1Q93096 GAPDHP40-201ENST00000505218 1006 ntBASIC13.63□□□□□ -0.23
PTP4A1Q93096 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 RFPL4AP1-201ENST00000530883 850 ntBASIC13.63□□□□□ -0.23
PTP4A1Q93096 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 AC044860.1-202ENST00000559481 777 ntBASIC13.63□□□□□ -0.23
PTP4A1Q93096 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PTP4A1Q93096 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PTP4A1Q93096 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
PTP4A1Q93096 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PTP4A1Q93096 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.62□□□□□ -0.23
PTP4A1Q93096 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PTP4A1Q93096 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
PTP4A1Q93096 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PTP4A1Q93096 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.62□□□□□ -0.23
PTP4A1Q93096 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PTP4A1Q93096 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms