Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 BX842568.4-201ENST00000421222 227 ntBASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 IGHV3-62-201ENST00000520057 340 ntBASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 AC091812.2-201ENST00000619081 385 ntBASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 LINC01230-201ENST00000625222 3017 ntBASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 AC107918.4-201ENST00000641966 3141 ntBASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB3IL1Q8TBN0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 AC092053.3-201ENST00000641308 4975 ntBASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 AL353705.2-201ENST00000428243 662 ntBASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 SPDYE11-202ENST00000450699 704 ntBASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB3IL1Q8TBN0 SLED1-202ENST00000512051 380 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms