Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM48Q8IWZ4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 TCAF2P1-201ENST00000291129 2421 ntBASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 RPS2P32-201ENST00000439199 892 ntBASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 AC020658.6-201ENST00000623564 1870 ntBASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM48Q8IWZ4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 ANKRD19P-201ENST00000338192 862 ntBASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 ACTBP8-201ENST00000403258 1108 ntBASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM48Q8IWZ4 AC007274.1-201ENST00000439805 662 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms