Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
APLFQ8IW19 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.12■□□□□ 0.01
APLFQ8IW19 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.12■□□□□ 0.01
APLFQ8IW19 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.12■□□□□ 0.01
APLFQ8IW19 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 SPDYE19P-201ENST00000338590 713 ntBASIC15.12■□□□□ 0.01
APLFQ8IW19 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.12■□□□□ 0.01
APLFQ8IW19 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.12■□□□□ 0.01
APLFQ8IW19 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
APLFQ8IW19 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.12■□□□□ 0.01
APLFQ8IW19 AL512384.1-201ENST00000406683 331 ntBASIC15.12■□□□□ 0.01
APLFQ8IW19 INE1-201ENST00000456273 945 ntBASIC15.12■□□□□ 0.01
APLFQ8IW19 RN7SL752P-201ENST00000463779 287 ntBASIC15.12■□□□□ 0.01
APLFQ8IW19 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.12■□□□□ 0.01
APLFQ8IW19 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.12■□□□□ 0.01
APLFQ8IW19 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.12■□□□□ 0.01
APLFQ8IW19 AL512361.1-201ENST00000554200 418 ntBASIC15.12■□□□□ 0.01
APLFQ8IW19 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.12■□□□□ 0.01
APLFQ8IW19 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.12■□□□□ 0.01
APLFQ8IW19 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.12■□□□□ 0.01
APLFQ8IW19 AC106886.1-201ENST00000568660 600 ntBASIC15.12■□□□□ 0.01
APLFQ8IW19 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.12■□□□□ 0.01
APLFQ8IW19 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.12■□□□□ 0.01
APLFQ8IW19 AL162274.1-201ENST00000617191 1098 ntBASIC15.12■□□□□ 0.01
APLFQ8IW19 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
APLFQ8IW19 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.12■□□□□ 0.01
APLFQ8IW19 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.12■□□□□ 0.01
APLFQ8IW19 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
APLFQ8IW19 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
APLFQ8IW19 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
APLFQ8IW19 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.12■□□□□ 0.01
APLFQ8IW19 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC15.12■□□□□ 0.01
APLFQ8IW19 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.12■□□□□ 0.01
APLFQ8IW19 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.12■□□□□ 0.01
APLFQ8IW19 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.12■□□□□ 0.01
APLFQ8IW19 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC15.12■□□□□ 0.01
APLFQ8IW19 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APLFQ8IW19 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.11■□□□□ 0.01
APLFQ8IW19 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 KRT8P44-201ENST00000441609 1350 ntBASIC15.11■□□□□ 0.01
APLFQ8IW19 KRT8P12-202ENST00000472924 1397 ntBASIC15.11■□□□□ 0.01
APLFQ8IW19 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.11■□□□□ 0.01
APLFQ8IW19 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
APLFQ8IW19 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
APLFQ8IW19 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.11■□□□□ 0.01
APLFQ8IW19 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.11■□□□□ 0.01
APLFQ8IW19 AC118758.2-201ENST00000614242 2813 ntBASIC15.11■□□□□ 0.01
APLFQ8IW19 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
APLFQ8IW19 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
APLFQ8IW19 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
APLFQ8IW19 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 SPDYE17-201ENST00000412399 783 ntBASIC15.11■□□□□ 0.01
APLFQ8IW19 MEP1AP4-201ENST00000423244 1087 ntBASIC15.11■□□□□ 0.01
APLFQ8IW19 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.11■□□□□ 0.01
APLFQ8IW19 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
APLFQ8IW19 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.11■□□□□ 0.01
APLFQ8IW19 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.11■□□□□ 0.01
APLFQ8IW19 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.11■□□□□ 0.01
APLFQ8IW19 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
APLFQ8IW19 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.11■□□□□ 0.01
APLFQ8IW19 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
APLFQ8IW19 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
APLFQ8IW19 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.11■□□□□ 0.01
APLFQ8IW19 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.11■□□□□ 0.01
APLFQ8IW19 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.11■□□□□ 0.01
APLFQ8IW19 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.11■□□□□ 0.01
APLFQ8IW19 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.11■□□□□ 0.01
APLFQ8IW19 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms