Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT28Q7Z3Y7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 PRAL-201ENST00000624952 3286 ntBASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 MARK2P16-201ENST00000605714 1723 ntBASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 AP000845.1-201ENST00000581677 2131 ntBASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 LINC00634-202ENST00000505157 222 ntBASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 DNM1P51-201ENST00000558149 522 ntBASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 RN7SL596P-201ENST00000582123 288 ntBASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 RNF146-211ENST00000609447 607 ntTSL 4 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 AC099398.1-201ENST00000567919 2776 ntBASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KRT28Q7Z3Y7 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 CYP2T1P-202ENST00000641596 2535 ntBASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 DBP-202ENST00000593500 712 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 AL022334.2-201ENST00000610000 484 ntBASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 AC138466.5-201ENST00000624002 808 ntBASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 MVK-217ENST00000639206 367 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
KRT28Q7Z3Y7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 RN7SL396P-201ENST00000471086 295 ntBASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT28Q7Z3Y7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT28Q7Z3Y7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT28Q7Z3Y7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
KRT28Q7Z3Y7 LINC01815-202ENST00000641468 1409 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms