Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 AC104989.1-201ENST00000519711 778 ntBASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 AC145423.3-201ENST00000615987 467 ntBASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 AL645728.2-202ENST00000641679 227 ntBASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFWD3Q6PCD5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 AC232323.1-201ENST00000540724 2099 ntBASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 REXO1L5P-201ENST00000622260 2098 ntBASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 BOLA2P3-201ENST00000404566 256 ntBASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 PRSS30P-206ENST00000641773 873 ntBASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.8■□□□□ 0.12
RFWD3Q6PCD5 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 AC016694.1-201ENST00000434179 700 ntBASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 AC114812.1-204ENST00000449669 728 ntBASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 KLF2P4-201ENST00000451959 1225 ntBASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.79■□□□□ 0.12
RFWD3Q6PCD5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms