Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.69□□□□□ -0.22
RTL6Q6ICC9 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTL6Q6ICC9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RTL6Q6ICC9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.69□□□□□ -0.22
RTL6Q6ICC9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTL6Q6ICC9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RTL6Q6ICC9 AL133338.1-201ENST00000565695 1517 ntBASIC13.69□□□□□ -0.22
RTL6Q6ICC9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RTL6Q6ICC9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RTL6Q6ICC9 AC127383.1-201ENST00000444697 1800 ntBASIC13.69□□□□□ -0.22
RTL6Q6ICC9 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
RTL6Q6ICC9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTL6Q6ICC9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RTL6Q6ICC9 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTL6Q6ICC9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.68□□□□□ -0.22
RTL6Q6ICC9 AC007787.1-201ENST00000588095 1583 ntBASIC13.68□□□□□ -0.22
RTL6Q6ICC9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 MIR326-201ENST00000362220 95 ntBASIC13.68□□□□□ -0.22
RTL6Q6ICC9 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 NUS1P3-201ENST00000423502 862 ntBASIC13.68□□□□□ -0.22
RTL6Q6ICC9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 AC244093.1-201ENST00000610837 814 ntBASIC13.68□□□□□ -0.22
RTL6Q6ICC9 AC091271.1-201ENST00000611877 1162 ntBASIC13.68□□□□□ -0.22
RTL6Q6ICC9 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTL6Q6ICC9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.67□□□□□ -0.22
RTL6Q6ICC9 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RTL6Q6ICC9 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms