Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 AC007292.2-201ENST00000593524 1812 ntBASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 FO681548.1-201ENST00000455617 1132 ntBASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 SLC25A47P1-201ENST00000531577 414 ntBASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PTPN20Q4JDL3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 AC005229.1-201ENST00000392885 409 ntBASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 AC092933.1-201ENST00000393644 945 ntBASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 POM121L8P-201ENST00000417732 1281 ntBASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 POM121L9P-203ENST00000441984 1285 ntBASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 AL355864.2-201ENST00000447420 863 ntBASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 BCRP2-202ENST00000447763 634 ntBASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 BCRP6-201ENST00000510112 632 ntBASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 BCRP7-201ENST00000511549 544 ntBASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 AC005225.4-201ENST00000557330 545 ntBASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 AC233724.13-201ENST00000598383 410 ntBASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms