Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.31■□□□□ 0.36
USH1GQ495M9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
USH1GQ495M9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
USH1GQ495M9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
USH1GQ495M9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 WASH3P-207ENST00000560956 1394 ntBASIC17.31■□□□□ 0.36
USH1GQ495M9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
USH1GQ495M9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
USH1GQ495M9 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.31■□□□□ 0.36
USH1GQ495M9 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.31■□□□□ 0.36
USH1GQ495M9 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
USH1GQ495M9 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.31■□□□□ 0.36
USH1GQ495M9 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.31■□□□□ 0.36
USH1GQ495M9 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.31■□□□□ 0.36
USH1GQ495M9 MIR4683-201ENST00000579659 81 ntBASIC17.31■□□□□ 0.36
USH1GQ495M9 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.31■□□□□ 0.36
USH1GQ495M9 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.31■□□□□ 0.36
USH1GQ495M9 ZACNP1-201ENST00000612259 710 ntBASIC17.31■□□□□ 0.36
USH1GQ495M9 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.31■□□□□ 0.36
USH1GQ495M9 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
USH1GQ495M9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.31■□□□□ 0.36
USH1GQ495M9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.31■□□□□ 0.36
USH1GQ495M9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 AC011840.2-201ENST00000563063 1520 ntBASIC17.31■□□□□ 0.36
USH1GQ495M9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
USH1GQ495M9 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
USH1GQ495M9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USH1GQ495M9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
USH1GQ495M9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.3■□□□□ 0.36
USH1GQ495M9 AC009093.2-202ENST00000620513 2079 ntBASIC17.3■□□□□ 0.36
USH1GQ495M9 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.3■□□□□ 0.36
USH1GQ495M9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
USH1GQ495M9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
USH1GQ495M9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.3■□□□□ 0.36
USH1GQ495M9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
USH1GQ495M9 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.3■□□□□ 0.36
USH1GQ495M9 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
USH1GQ495M9 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
USH1GQ495M9 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.3■□□□□ 0.36
USH1GQ495M9 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.3■□□□□ 0.36
USH1GQ495M9 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.3■□□□□ 0.36
USH1GQ495M9 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.3■□□□□ 0.36
USH1GQ495M9 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.3■□□□□ 0.36
USH1GQ495M9 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.3■□□□□ 0.36
USH1GQ495M9 AC104982.3-201ENST00000581995 514 ntBASIC17.3■□□□□ 0.36
USH1GQ495M9 AC244093.1-201ENST00000610837 814 ntBASIC17.3■□□□□ 0.36
USH1GQ495M9 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
USH1GQ495M9 MIR6787-201ENST00000616675 61 ntBASIC17.3■□□□□ 0.36
USH1GQ495M9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.3■□□□□ 0.36
USH1GQ495M9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 AC023090.2-201ENST00000625182 2110 ntBASIC17.3■□□□□ 0.36
USH1GQ495M9 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.3■□□□□ 0.36
USH1GQ495M9 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.3■□□□□ 0.36
USH1GQ495M9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USH1GQ495M9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.3■□□□□ 0.36
USH1GQ495M9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.3■□□□□ 0.36
USH1GQ495M9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.29■□□□□ 0.36
USH1GQ495M9 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USH1GQ495M9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms