Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.12■□□□□ 0.49
RFX7Q2KHR2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 COX5BP1-201ENST00000507622 393 ntBASIC18.12■□□□□ 0.49
RFX7Q2KHR2 ALG3P1-201ENST00000508806 1114 ntBASIC18.12■□□□□ 0.49
RFX7Q2KHR2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 AP001258.2-201ENST00000529891 490 ntBASIC18.12■□□□□ 0.49
RFX7Q2KHR2 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 OR10B1P-201ENST00000601666 907 ntBASIC18.12■□□□□ 0.49
RFX7Q2KHR2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.12■□□□□ 0.49
RFX7Q2KHR2 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 DBET-201ENST00000630918 3363 ntBASIC18.12■□□□□ 0.49
RFX7Q2KHR2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 AC011840.2-201ENST00000563063 1520 ntBASIC18.11■□□□□ 0.49
RFX7Q2KHR2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 CHMP1AP1-201ENST00000445563 662 ntBASIC18.11■□□□□ 0.49
RFX7Q2KHR2 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 HIST2H2BB-201ENST00000449108 381 ntBASIC18.11■□□□□ 0.49
RFX7Q2KHR2 FTLP10-202ENST00000505798 471 ntBASIC18.11■□□□□ 0.49
RFX7Q2KHR2 GCOM2-201ENST00000509133 1104 ntBASIC18.11■□□□□ 0.49
RFX7Q2KHR2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 AC104982.3-201ENST00000581995 514 ntBASIC18.11■□□□□ 0.49
RFX7Q2KHR2 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.11■□□□□ 0.49
RFX7Q2KHR2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RFX7Q2KHR2 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 RN7SKP175-201ENST00000408472 289 ntBASIC18.1■□□□□ 0.49
RFX7Q2KHR2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 POM121L10P-201ENST00000436994 1285 ntBASIC18.1■□□□□ 0.49
RFX7Q2KHR2 BX284668.4-201ENST00000453917 508 ntBASIC18.1■□□□□ 0.49
RFX7Q2KHR2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 SCARNA20.5-201ENST00000516991 142 ntBASIC18.1■□□□□ 0.49
RFX7Q2KHR2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 ZACNP1-201ENST00000612259 710 ntBASIC18.1■□□□□ 0.49
RFX7Q2KHR2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 CROCCP1-201ENST00000426910 5675 ntBASIC18.1■□□□□ 0.49
RFX7Q2KHR2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
RFX7Q2KHR2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms