Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH17Q12864 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH17Q12864 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
CDH17Q12864 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH17Q12864 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH17Q12864 MYCLP2-201ENST00000449268 967 ntBASIC15.3■□□□□ 0.04
CDH17Q12864 AC114812.1-204ENST00000449669 728 ntBASIC15.3■□□□□ 0.04
CDH17Q12864 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH17Q12864 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH17Q12864 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH17Q12864 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH17Q12864 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH17Q12864 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CDH17Q12864 DUX4L47-201ENST00000566374 394 ntBASIC15.3■□□□□ 0.04
CDH17Q12864 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH17Q12864 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH17Q12864 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH17Q12864 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH17Q12864 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 LINC02560-201ENST00000596379 459 ntBASIC15.3■□□□□ 0.04
CDH17Q12864 AC133539.2-201ENST00000604757 467 ntBASIC15.3■□□□□ 0.04
CDH17Q12864 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH17Q12864 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH17Q12864 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH17Q12864 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH17Q12864 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH17Q12864 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH17Q12864 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 AC005089.1-201ENST00000619486 2241 ntBASIC15.29■□□□□ 0.04
CDH17Q12864 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.29■□□□□ 0.04
CDH17Q12864 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH17Q12864 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDH17Q12864 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDH17Q12864 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDH17Q12864 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH17Q12864 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDH17Q12864 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH17Q12864 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH17Q12864 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH17Q12864 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 AL136379.1-201ENST00000623471 2642 ntBASIC15.29■□□□□ 0.04
CDH17Q12864 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH17Q12864 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH17Q12864 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH17Q12864 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDH17Q12864 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDH17Q12864 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDH17Q12864 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.29■□□□□ 0.04
CDH17Q12864 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.29■□□□□ 0.04
CDH17Q12864 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH17Q12864 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH17Q12864 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.29■□□□□ 0.04
CDH17Q12864 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDH17Q12864 AC022616.1-201ENST00000518688 554 ntBASIC15.29■□□□□ 0.04
CDH17Q12864 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.29■□□□□ 0.04
CDH17Q12864 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH17Q12864 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.29■□□□□ 0.04
CDH17Q12864 CHCHD2P3-201ENST00000603038 451 ntBASIC15.29■□□□□ 0.04
CDH17Q12864 AL096865.1-201ENST00000606796 927 ntBASIC15.29■□□□□ 0.04
CDH17Q12864 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDH17Q12864 AL603764.1-201ENST00000636452 321 ntBASIC15.29■□□□□ 0.04
CDH17Q12864 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH17Q12864 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH17Q12864 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH17Q12864 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDH17Q12864 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CDH17Q12864 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH17Q12864 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH17Q12864 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH17Q12864 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH17Q12864 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms