Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.82■□□□□ 0.12
CBX1P83916 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.82■□□□□ 0.12
CBX1P83916 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.82■□□□□ 0.12
CBX1P83916 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.82■□□□□ 0.12
CBX1P83916 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 AC010536.1-201ENST00000538868 2611 ntBASIC15.82■□□□□ 0.12
CBX1P83916 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC15.82■□□□□ 0.12
CBX1P83916 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CBX1P83916 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CBX1P83916 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.82■□□□□ 0.12
CBX1P83916 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.82■□□□□ 0.12
CBX1P83916 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.82■□□□□ 0.12
CBX1P83916 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CBX1P83916 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC15.82■□□□□ 0.12
CBX1P83916 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX1P83916 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 AC112176.1-201ENST00000565428 3024 ntBASIC15.81■□□□□ 0.12
CBX1P83916 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX1P83916 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CBX1P83916 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CBX1P83916 STARP1-201ENST00000397973 869 ntBASIC15.81■□□□□ 0.12
CBX1P83916 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.81■□□□□ 0.12
CBX1P83916 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX1P83916 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CBX1P83916 AC093724.1-201ENST00000448659 1027 ntBASIC15.81■□□□□ 0.12
CBX1P83916 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX1P83916 SNORA78-201ENST00000459373 127 ntBASIC15.81■□□□□ 0.12
CBX1P83916 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX1P83916 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX1P83916 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX1P83916 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX1P83916 AL441883.1-201ENST00000566170 1045 ntBASIC15.81■□□□□ 0.12
CBX1P83916 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX1P83916 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX1P83916 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX1P83916 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.81■□□□□ 0.12
CBX1P83916 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX1P83916 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX1P83916 AC010331.1-201ENST00000611423 582 ntBASIC15.81■□□□□ 0.12
CBX1P83916 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.81■□□□□ 0.12
CBX1P83916 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX1P83916 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX1P83916 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX1P83916 AC011498.7-201ENST00000624986 2027 ntBASIC15.8■□□□□ 0.12
CBX1P83916 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX1P83916 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX1P83916 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX1P83916 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC15.8■□□□□ 0.12
CBX1P83916 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.8■□□□□ 0.12
CBX1P83916 AC073335.2-201ENST00000610177 3441 ntBASIC15.8■□□□□ 0.12
CBX1P83916 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX1P83916 DLX4-206ENST00000611342 1662 ntBASIC15.8■□□□□ 0.12
CBX1P83916 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX1P83916 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX1P83916 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX1P83916 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CBX1P83916 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.8■□□□□ 0.12
CBX1P83916 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC15.8■□□□□ 0.12
CBX1P83916 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC15.8■□□□□ 0.12
CBX1P83916 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.8■□□□□ 0.12
CBX1P83916 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX1P83916 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX1P83916 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC15.8■□□□□ 0.12
CBX1P83916 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CBX1P83916 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX1P83916 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CBX1P83916 SPDYE21P-201ENST00000413323 827 ntBASIC15.8■□□□□ 0.12
CBX1P83916 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CBX1P83916 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms