Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 AC112176.1-201ENST00000565428 3024 ntBASIC11.84□□□□□ -0.51
RAB5BP61020 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
RAB5BP61020 AP001282.1-201ENST00000531301 1499 ntBASIC11.84□□□□□ -0.51
RAB5BP61020 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB5BP61020 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB5BP61020 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB5BP61020 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB5BP61020 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 HBZP1-201ENST00000354915 429 ntBASIC11.84□□□□□ -0.51
RAB5BP61020 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.84□□□□□ -0.51
RAB5BP61020 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB5BP61020 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB5BP61020 ADM-205ENST00000528544 586 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB5BP61020 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.84□□□□□ -0.51
RAB5BP61020 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC11.84□□□□□ -0.51
RAB5BP61020 REXO1L10P-201ENST00000615707 1290 ntBASIC11.84□□□□□ -0.51
RAB5BP61020 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 REXO1L12P-201ENST00000622156 912 ntBASIC11.84□□□□□ -0.51
RAB5BP61020 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB5BP61020 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
RAB5BP61020 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
RAB5BP61020 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
RAB5BP61020 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
RAB5BP61020 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
RAB5BP61020 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB5BP61020 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
RAB5BP61020 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB5BP61020 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
RAB5BP61020 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
RAB5BP61020 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
RAB5BP61020 MKRN5P-201ENST00000445263 1467 ntBASIC11.83□□□□□ -0.52
RAB5BP61020 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB5BP61020 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
RAB5BP61020 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB5BP61020 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB5BP61020 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
RAB5BP61020 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC11.83□□□□□ -0.52
RAB5BP61020 AC018445.4-201ENST00000624066 2291 ntBASIC11.83□□□□□ -0.52
RAB5BP61020 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 Z98257.2-202ENST00000641138 1548 ntBASIC11.83□□□□□ -0.52
RAB5BP61020 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
RAB5BP61020 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB5BP61020 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 AC245100.5-201ENST00000452108 331 ntBASIC11.83□□□□□ -0.52
RAB5BP61020 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB5BP61020 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB5BP61020 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
RAB5BP61020 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB5BP61020 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB5BP61020 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC11.83□□□□□ -0.52
RAB5BP61020 C2orf69P3-201ENST00000565542 1120 ntBASIC11.83□□□□□ -0.52
RAB5BP61020 MPDU1-223ENST00000582151 728 ntBASIC11.83□□□□□ -0.52
RAB5BP61020 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB5BP61020 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB5BP61020 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
RAB5BP61020 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB5BP61020 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB5BP61020 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB5BP61020 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB5BP61020 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms