Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
VSX2P58304 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
VSX2P58304 AL138709.1-201ENST00000614840 1693 ntBASIC14.52□□□□□ -0.08
VSX2P58304 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VSX2P58304 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
VSX2P58304 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.52□□□□□ -0.08
VSX2P58304 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.52□□□□□ -0.08
VSX2P58304 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VSX2P58304 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VSX2P58304 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.52□□□□□ -0.08
VSX2P58304 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VSX2P58304 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.52□□□□□ -0.08
VSX2P58304 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.52□□□□□ -0.08
VSX2P58304 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
VSX2P58304 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VSX2P58304 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VSX2P58304 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.52□□□□□ -0.09
VSX2P58304 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
VSX2P58304 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.52□□□□□ -0.09
VSX2P58304 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 RPL7P3-201ENST00000441388 714 ntBASIC14.52□□□□□ -0.09
VSX2P58304 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.52□□□□□ -0.09
VSX2P58304 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
VSX2P58304 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.52□□□□□ -0.09
VSX2P58304 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
VSX2P58304 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.52□□□□□ -0.09
VSX2P58304 AC133552.6-201ENST00000613406 534 ntBASIC14.52□□□□□ -0.09
VSX2P58304 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
VSX2P58304 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
VSX2P58304 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.52□□□□□ -0.09
VSX2P58304 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
VSX2P58304 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.52□□□□□ -0.09
VSX2P58304 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.52□□□□□ -0.09
VSX2P58304 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VSX2P58304 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VSX2P58304 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.51□□□□□ -0.09
VSX2P58304 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VSX2P58304 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.51□□□□□ -0.09
VSX2P58304 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VSX2P58304 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
VSX2P58304 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.51□□□□□ -0.09
VSX2P58304 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VSX2P58304 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 AL365209.1-201ENST00000624418 6473 ntBASIC14.51□□□□□ -0.09
VSX2P58304 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.51□□□□□ -0.09
VSX2P58304 EIF3FP3-201ENST00000434851 1086 ntBASIC14.51□□□□□ -0.09
VSX2P58304 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.51□□□□□ -0.09
VSX2P58304 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
VSX2P58304 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.51□□□□□ -0.09
VSX2P58304 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.51□□□□□ -0.09
VSX2P58304 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.51□□□□□ -0.09
VSX2P58304 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.51□□□□□ -0.09
VSX2P58304 KRT90P-201ENST00000549264 1064 ntBASIC14.51□□□□□ -0.09
VSX2P58304 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.51□□□□□ -0.09
VSX2P58304 AP005482.1-201ENST00000563722 1273 ntBASIC14.51□□□□□ -0.09
VSX2P58304 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.51□□□□□ -0.09
VSX2P58304 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.51□□□□□ -0.09
VSX2P58304 AC055811.4-201ENST00000624039 1754 ntBASIC14.51□□□□□ -0.09
VSX2P58304 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
VSX2P58304 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VSX2P58304 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VSX2P58304 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms