Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.68□□□□□ -0.22
CASP6P55212 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CASP6P55212 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CASP6P55212 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.68□□□□□ -0.22
CASP6P55212 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CASP6P55212 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CASP6P55212 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CASP6P55212 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.68□□□□□ -0.22
CASP6P55212 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.67□□□□□ -0.22
CASP6P55212 AC024909.3-201ENST00000611513 2257 ntBASIC13.67□□□□□ -0.22
CASP6P55212 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.67□□□□□ -0.22
CASP6P55212 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.67□□□□□ -0.22
CASP6P55212 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.67□□□□□ -0.22
CASP6P55212 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CASP6P55212 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.67□□□□□ -0.22
CASP6P55212 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CASP6P55212 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CASP6P55212 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.67□□□□□ -0.22
CASP6P55212 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.67□□□□□ -0.22
CASP6P55212 AL133466.1-201ENST00000447582 150 ntBASIC13.67□□□□□ -0.22
CASP6P55212 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.67□□□□□ -0.22
CASP6P55212 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.67□□□□□ -0.22
CASP6P55212 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CASP6P55212 AL603764.1-201ENST00000636452 321 ntBASIC13.67□□□□□ -0.22
CASP6P55212 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CASP6P55212 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CASP6P55212 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CASP6P55212 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.67□□□□□ -0.22
CASP6P55212 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CASP6P55212 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CASP6P55212 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CASP6P55212 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
CASP6P55212 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.66□□□□□ -0.22
CASP6P55212 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.66□□□□□ -0.22
CASP6P55212 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CASP6P55212 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.66□□□□□ -0.22
CASP6P55212 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CASP6P55212 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CASP6P55212 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CASP6P55212 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.66□□□□□ -0.22
CASP6P55212 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.66□□□□□ -0.22
CASP6P55212 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.66□□□□□ -0.22
CASP6P55212 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CASP6P55212 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.66□□□□□ -0.22
CASP6P55212 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.66□□□□□ -0.22
CASP6P55212 ZACNP1-201ENST00000612259 710 ntBASIC13.66□□□□□ -0.22
CASP6P55212 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.66□□□□□ -0.22
CASP6P55212 PRSS30P-206ENST00000641773 873 ntBASIC13.66□□□□□ -0.22
CASP6P55212 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CASP6P55212 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.66□□□□□ -0.22
CASP6P55212 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CASP6P55212 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.66□□□□□ -0.22
CASP6P55212 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.66□□□□□ -0.22
CASP6P55212 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.65□□□□□ -0.22
CASP6P55212 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CASP6P55212 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CASP6P55212 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CASP6P55212 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms