Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 REXO1L4P-201ENST00000605109 1937 ntBASIC11.08□□□□□ -0.64
APOC4P55056 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.08□□□□□ -0.64
APOC4P55056 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
APOC4P55056 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC11.08□□□□□ -0.64
APOC4P55056 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
APOC4P55056 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC11.08□□□□□ -0.64
APOC4P55056 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC11.08□□□□□ -0.64
APOC4P55056 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
APOC4P55056 BTBD6P1-201ENST00000412176 1267 ntBASIC11.08□□□□□ -0.64
APOC4P55056 AC079178.1-201ENST00000420915 656 ntBASIC11.08□□□□□ -0.64
APOC4P55056 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.08□□□□□ -0.64
APOC4P55056 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC11.08□□□□□ -0.64
APOC4P55056 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC11.08□□□□□ -0.64
APOC4P55056 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC11.08□□□□□ -0.64
APOC4P55056 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.08□□□□□ -0.64
APOC4P55056 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
APOC4P55056 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.08□□□□□ -0.64
APOC4P55056 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC11.08□□□□□ -0.64
APOC4P55056 DIO1-215ENST00000610607 796 ntTSL 5 BASIC11.08□□□□□ -0.64
APOC4P55056 AC091271.1-201ENST00000611877 1162 ntBASIC11.08□□□□□ -0.64
APOC4P55056 ZACNP1-201ENST00000612259 710 ntBASIC11.08□□□□□ -0.64
APOC4P55056 AC009542.2-202ENST00000619004 1067 ntBASIC11.08□□□□□ -0.64
APOC4P55056 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.08□□□□□ -0.64
APOC4P55056 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.08□□□□□ -0.64
APOC4P55056 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.08□□□□□ -0.64
APOC4P55056 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 WARS-232ENST00000556645 2508 ntTSL 5 BASIC11.08□□□□□ -0.64
APOC4P55056 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
APOC4P55056 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
APOC4P55056 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
APOC4P55056 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
APOC4P55056 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOC4P55056 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
APOC4P55056 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
APOC4P55056 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 REXO1L5P-201ENST00000622260 2098 ntBASIC11.07□□□□□ -0.64
APOC4P55056 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC4P55056 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
APOC4P55056 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
APOC4P55056 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
APOC4P55056 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.07□□□□□ -0.64
APOC4P55056 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
APOC4P55056 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC4P55056 HLA-K-203ENST00000430151 1046 ntBASIC11.07□□□□□ -0.64
APOC4P55056 MTX1P1-201ENST00000440904 838 ntBASIC11.07□□□□□ -0.64
APOC4P55056 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC11.07□□□□□ -0.64
APOC4P55056 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.07□□□□□ -0.64
APOC4P55056 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
APOC4P55056 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
APOC4P55056 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.07□□□□□ -0.64
APOC4P55056 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
APOC4P55056 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC11.07□□□□□ -0.64
APOC4P55056 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC4P55056 DUX4L47-201ENST00000566374 394 ntBASIC11.07□□□□□ -0.64
APOC4P55056 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC4P55056 NAT9-222ENST00000583476 583 ntTSL 3 BASIC11.07□□□□□ -0.64
APOC4P55056 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC4P55056 OR10B1P-201ENST00000601666 907 ntBASIC11.07□□□□□ -0.64
APOC4P55056 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC11.07□□□□□ -0.64
APOC4P55056 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.07□□□□□ -0.64
APOC4P55056 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC4P55056 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC4P55056 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms