Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.64■□□□□ 0.09
NEK3P51956 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NEK3P51956 ACTG1P3-201ENST00000431775 1114 ntBASIC15.64■□□□□ 0.09
NEK3P51956 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.64■□□□□ 0.09
NEK3P51956 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEK3P51956 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.64■□□□□ 0.09
NEK3P51956 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.64■□□□□ 0.09
NEK3P51956 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.64■□□□□ 0.09
NEK3P51956 AC026410.3-201ENST00000514280 936 ntBASIC15.64■□□□□ 0.09
NEK3P51956 TDH-203ENST00000531764 1110 ntBASIC15.64■□□□□ 0.09
NEK3P51956 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.64■□□□□ 0.09
NEK3P51956 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NEK3P51956 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.64■□□□□ 0.09
NEK3P51956 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.64■□□□□ 0.09
NEK3P51956 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NEK3P51956 RAB43P1-201ENST00000561790 589 ntBASIC15.64■□□□□ 0.09
NEK3P51956 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.64■□□□□ 0.09
NEK3P51956 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NEK3P51956 MIR5189-201ENST00000577370 114 ntBASIC15.64■□□□□ 0.09
NEK3P51956 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.64■□□□□ 0.09
NEK3P51956 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEK3P51956 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.64■□□□□ 0.09
NEK3P51956 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.64■□□□□ 0.09
NEK3P51956 RPSAP52-203ENST00000622976 1023 ntBASIC15.64■□□□□ 0.09
NEK3P51956 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.64■□□□□ 0.09
NEK3P51956 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEK3P51956 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.64■□□□□ 0.09
NEK3P51956 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.64■□□□□ 0.09
NEK3P51956 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
NEK3P51956 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.64■□□□□ 0.09
NEK3P51956 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEK3P51956 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NEK3P51956 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEK3P51956 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.64■□□□□ 0.09
NEK3P51956 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NEK3P51956 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 DRD5P1-201ENST00000456605 1438 ntBASIC15.63■□□□□ 0.09
NEK3P51956 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
NEK3P51956 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.63■□□□□ 0.09
NEK3P51956 AC079776.1-201ENST00000401540 1152 ntBASIC15.63■□□□□ 0.09
NEK3P51956 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 AC112492.5-201ENST00000421897 457 ntBASIC15.63■□□□□ 0.09
NEK3P51956 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.63■□□□□ 0.09
NEK3P51956 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 ACA64.2-201ENST00000459014 129 ntBASIC15.63■□□□□ 0.09
NEK3P51956 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.63■□□□□ 0.09
NEK3P51956 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NEK3P51956 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.63■□□□□ 0.09
NEK3P51956 AL359881.2-201ENST00000602973 570 ntBASIC15.63■□□□□ 0.09
NEK3P51956 AC107373.2-201ENST00000607735 490 ntBASIC15.63■□□□□ 0.09
NEK3P51956 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.63■□□□□ 0.09
NEK3P51956 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.63■□□□□ 0.09
NEK3P51956 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.63■□□□□ 0.09
NEK3P51956 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
NEK3P51956 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.63■□□□□ 0.09
NEK3P51956 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NEK3P51956 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.63■□□□□ 0.09
NEK3P51956 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NEK3P51956 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.62■□□□□ 0.09
NEK3P51956 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.62■□□□□ 0.09
NEK3P51956 AC041040.2-201ENST00000622926 2899 ntBASIC15.62■□□□□ 0.09
NEK3P51956 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.62■□□□□ 0.09
NEK3P51956 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.62■□□□□ 0.09
NEK3P51956 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.62■□□□□ 0.09
NEK3P51956 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NEK3P51956 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
NEK3P51956 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms