Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CBX5P45973 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.14□□□□□ -0.31
CBX5P45973 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.14□□□□□ -0.31
CBX5P45973 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 TRIM80P-201ENST00000455685 2848 ntBASIC13.14□□□□□ -0.31
CBX5P45973 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.14□□□□□ -0.31
CBX5P45973 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CBX5P45973 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.14□□□□□ -0.31
CBX5P45973 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.14□□□□□ -0.31
CBX5P45973 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CBX5P45973 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CBX5P45973 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.13□□□□□ -0.31
CBX5P45973 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CBX5P45973 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.13□□□□□ -0.31
CBX5P45973 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.13□□□□□ -0.31
CBX5P45973 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.13□□□□□ -0.31
CBX5P45973 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CBX5P45973 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.13□□□□□ -0.31
CBX5P45973 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CBX5P45973 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CBX5P45973 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CBX5P45973 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.13□□□□□ -0.31
CBX5P45973 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CBX5P45973 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CBX5P45973 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.13□□□□□ -0.31
CBX5P45973 IGHV3-22-201ENST00000520721 359 ntBASIC13.13□□□□□ -0.31
CBX5P45973 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.13□□□□□ -0.31
CBX5P45973 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.13□□□□□ -0.31
CBX5P45973 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.13□□□□□ -0.31
CBX5P45973 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.13□□□□□ -0.31
CBX5P45973 PDPK2P-202ENST00000562415 1191 ntBASIC13.13□□□□□ -0.31
CBX5P45973 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.13□□□□□ -0.31
CBX5P45973 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CBX5P45973 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.13□□□□□ -0.31
CBX5P45973 AC099522.2-201ENST00000607001 744 ntBASIC13.13□□□□□ -0.31
CBX5P45973 Z83851.2-201ENST00000609564 659 ntBASIC13.13□□□□□ -0.31
CBX5P45973 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.13□□□□□ -0.31
CBX5P45973 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.13□□□□□ -0.31
CBX5P45973 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.13□□□□□ -0.31
CBX5P45973 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CBX5P45973 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CBX5P45973 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.13□□□□□ -0.31
CBX5P45973 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.13□□□□□ -0.31
CBX5P45973 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CBX5P45973 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CBX5P45973 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CBX5P45973 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CBX5P45973 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CBX5P45973 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CBX5P45973 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CBX5P45973 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CBX5P45973 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.12□□□□□ -0.31
CBX5P45973 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms