Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CHRNA4P43681 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNA4P43681 ACKR1-201ENST00000368121 1240 ntBASIC15.26■□□□□ 0.03
CHRNA4P43681 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 ACTBP8-201ENST00000403258 1108 ntBASIC15.26■□□□□ 0.03
CHRNA4P43681 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CHRNA4P43681 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNA4P43681 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 RN7SL752P-201ENST00000463779 287 ntBASIC15.26■□□□□ 0.03
CHRNA4P43681 AC022616.1-201ENST00000518688 554 ntBASIC15.26■□□□□ 0.03
CHRNA4P43681 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 AL596325.1-201ENST00000563991 1082 ntBASIC15.26■□□□□ 0.03
CHRNA4P43681 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNA4P43681 AC004466.1-201ENST00000599515 1080 ntBASIC15.26■□□□□ 0.03
CHRNA4P43681 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CHRNA4P43681 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CHRNA4P43681 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 LRRC59-203ENST00000576448 1531 ntBASIC15.26■□□□□ 0.03
CHRNA4P43681 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.26■□□□□ 0.03
CHRNA4P43681 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CHRNA4P43681 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNA4P43681 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHRNA4P43681 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNA4P43681 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CHRNA4P43681 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CHRNA4P43681 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 KRT8P35-201ENST00000483942 1338 ntBASIC15.25■□□□□ 0.03
CHRNA4P43681 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNA4P43681 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNA4P43681 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.25■□□□□ 0.03
CHRNA4P43681 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHRNA4P43681 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHRNA4P43681 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CHRNA4P43681 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.25■□□□□ 0.03
CHRNA4P43681 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNA4P43681 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
CHRNA4P43681 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNA4P43681 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.25■□□□□ 0.03
CHRNA4P43681 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNA4P43681 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNA4P43681 INE1-201ENST00000456273 945 ntBASIC15.25■□□□□ 0.03
CHRNA4P43681 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.25■□□□□ 0.03
CHRNA4P43681 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.25■□□□□ 0.03
CHRNA4P43681 TDH-203ENST00000531764 1110 ntBASIC15.25■□□□□ 0.03
CHRNA4P43681 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.25■□□□□ 0.03
CHRNA4P43681 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
CHRNA4P43681 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CHRNA4P43681 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNA4P43681 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CHRNA4P43681 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNA4P43681 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNA4P43681 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNA4P43681 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNA4P43681 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CHRNA4P43681 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CHRNA4P43681 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.24■□□□□ 0.03
CHRNA4P43681 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CHRNA4P43681 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRNA4P43681 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRNA4P43681 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHRNA4P43681 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CHRNA4P43681 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRNA4P43681 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHRNA4P43681 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRNA4P43681 AC098614.1-201ENST00000368528 745 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms