Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC1A1P43005 AC104596.2-201ENST00000512793 793 ntBASIC15.84■□□□□ 0.13
SLC1A1P43005 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC1A1P43005 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC1A1P43005 AC120045.2-201ENST00000567334 178 ntBASIC15.84■□□□□ 0.13
SLC1A1P43005 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC1A1P43005 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC1A1P43005 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC1A1P43005 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC1A1P43005 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC1A1P43005 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SLC1A1P43005 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SLC1A1P43005 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 AC139749.1-202ENST00000617529 3139 ntBASIC15.84■□□□□ 0.13
SLC1A1P43005 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC1A1P43005 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.84■□□□□ 0.13
SLC1A1P43005 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
SLC1A1P43005 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC1A1P43005 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SLC1A1P43005 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SLC1A1P43005 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC1A1P43005 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC1A1P43005 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC1A1P43005 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SLC1A1P43005 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC1A1P43005 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC1A1P43005 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
SLC1A1P43005 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SLC1A1P43005 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
SLC1A1P43005 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
SLC1A1P43005 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC1A1P43005 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC1A1P43005 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
SLC1A1P43005 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SLC1A1P43005 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SLC1A1P43005 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC1A1P43005 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SLC1A1P43005 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC1A1P43005 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC1A1P43005 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC1A1P43005 AL442647.2-201ENST00000429864 857 ntBASIC15.83■□□□□ 0.12
SLC1A1P43005 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC1A1P43005 AC114812.1-204ENST00000449669 728 ntBASIC15.83■□□□□ 0.12
SLC1A1P43005 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC1A1P43005 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC1A1P43005 AC055876.2-201ENST00000531834 546 ntBASIC15.83■□□□□ 0.12
SLC1A1P43005 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC1A1P43005 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC1A1P43005 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
SLC1A1P43005 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC1A1P43005 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SLC1A1P43005 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC1A1P43005 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC1A1P43005 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC1A1P43005 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC1A1P43005 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC1A1P43005 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC1A1P43005 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC1A1P43005 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC1A1P43005 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC1A1P43005 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC1A1P43005 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC1A1P43005 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC1A1P43005 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC1A1P43005 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC1A1P43005 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SLC1A1P43005 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC1A1P43005 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC1A1P43005 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC1A1P43005 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC1A1P43005 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC1A1P43005 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.82■□□□□ 0.12
SLC1A1P43005 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC1A1P43005 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC1A1P43005 AC022616.1-201ENST00000518688 554 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms