Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRIM23P36406 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.85□□□□□ -0.03
TRIM23P36406 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRIM23P36406 RN7SKP175-201ENST00000408472 289 ntBASIC14.85□□□□□ -0.03
TRIM23P36406 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRIM23P36406 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM23P36406 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRIM23P36406 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.85□□□□□ -0.03
TRIM23P36406 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.85□□□□□ -0.03
TRIM23P36406 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM23P36406 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRIM23P36406 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM23P36406 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.85□□□□□ -0.03
TRIM23P36406 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
TRIM23P36406 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.85□□□□□ -0.03
TRIM23P36406 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM23P36406 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM23P36406 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM23P36406 AC013268.4-201ENST00000637413 2228 ntBASIC14.85□□□□□ -0.03
TRIM23P36406 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM23P36406 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 AC023824.1-201ENST00000562945 2975 ntBASIC14.85□□□□□ -0.03
TRIM23P36406 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM23P36406 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM23P36406 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM23P36406 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM23P36406 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM23P36406 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRIM23P36406 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
TRIM23P36406 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 RN7SKP230-201ENST00000365642 335 ntBASIC14.84□□□□□ -0.03
TRIM23P36406 MIR663B-201ENST00000408361 115 ntBASIC14.84□□□□□ -0.03
TRIM23P36406 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.84□□□□□ -0.03
TRIM23P36406 TLE1P1-201ENST00000422965 589 ntBASIC14.84□□□□□ -0.03
TRIM23P36406 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM23P36406 HSPB1P2-201ENST00000448722 546 ntBASIC14.84□□□□□ -0.03
TRIM23P36406 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM23P36406 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 FAM8A2P-201ENST00000528813 1142 ntBASIC14.84□□□□□ -0.03
TRIM23P36406 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TRIM23P36406 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM23P36406 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.84□□□□□ -0.03
TRIM23P36406 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.84□□□□□ -0.03
TRIM23P36406 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM23P36406 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM23P36406 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRIM23P36406 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM23P36406 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM23P36406 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM23P36406 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM23P36406 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
TRIM23P36406 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM23P36406 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM23P36406 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM23P36406 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM23P36406 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM23P36406 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM23P36406 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.83□□□□□ -0.03
TRIM23P36406 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TRIM23P36406 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM23P36406 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM23P36406 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM23P36406 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM23P36406 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRIM23P36406 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms