Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT9P35527 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT9P35527 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT9P35527 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT9P35527 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KRT9P35527 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT9P35527 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
KRT9P35527 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT9P35527 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT9P35527 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT9P35527 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
KRT9P35527 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT9P35527 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT9P35527 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT9P35527 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT9P35527 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT9P35527 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
KRT9P35527 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT9P35527 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT9P35527 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT9P35527 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT9P35527 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT9P35527 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT9P35527 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT9P35527 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT9P35527 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT9P35527 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT9P35527 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
KRT9P35527 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT9P35527 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT9P35527 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT9P35527 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
KRT9P35527 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT9P35527 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
KRT9P35527 BASP1P1-201ENST00000430708 665 ntBASIC16.61■□□□□ 0.25
KRT9P35527 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
KRT9P35527 RFPL4AP1-201ENST00000530883 850 ntBASIC16.61■□□□□ 0.25
KRT9P35527 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KRT9P35527 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT9P35527 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT9P35527 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT9P35527 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
KRT9P35527 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KRT9P35527 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT9P35527 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT9P35527 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
KRT9P35527 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT9P35527 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT9P35527 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT9P35527 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
KRT9P35527 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
KRT9P35527 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KRT9P35527 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT9P35527 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
KRT9P35527 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
KRT9P35527 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KRT9P35527 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
KRT9P35527 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KRT9P35527 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT9P35527 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT9P35527 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.6■□□□□ 0.25
KRT9P35527 AC114501.2-201ENST00000439631 535 ntBASIC16.6■□□□□ 0.25
KRT9P35527 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT9P35527 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.6■□□□□ 0.25
KRT9P35527 AC009407.1-201ENST00000568958 598 ntBASIC16.6■□□□□ 0.25
KRT9P35527 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.6■□□□□ 0.25
KRT9P35527 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT9P35527 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT9P35527 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT9P35527 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT9P35527 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT9P35527 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT9P35527 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT9P35527 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT9P35527 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
KRT9P35527 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KRT9P35527 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms