Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPS1P31327 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPS1P31327 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC20.74■□□□□ 0.91
CPS1P31327 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPS1P31327 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPS1P31327 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC20.74■□□□□ 0.91
CPS1P31327 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC20.74■□□□□ 0.91
CPS1P31327 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPS1P31327 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPS1P31327 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPS1P31327 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC20.73■□□□□ 0.91
CPS1P31327 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPS1P31327 AL451000.1-201ENST00000451300 1186 ntBASIC20.73■□□□□ 0.91
CPS1P31327 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC20.73■□□□□ 0.91
CPS1P31327 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC20.73■□□□□ 0.91
CPS1P31327 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPS1P31327 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.73■□□□□ 0.91
CPS1P31327 TMBIM7P-202ENST00000641474 1516 ntBASIC20.73■□□□□ 0.91
CPS1P31327 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPS1P31327 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.73■□□□□ 0.91
CPS1P31327 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPS1P31327 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPS1P31327 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CPS1P31327 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPS1P31327 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPS1P31327 AC084018.2-201ENST00000613093 2607 ntBASIC20.73■□□□□ 0.91
CPS1P31327 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.73■□□□□ 0.91
CPS1P31327 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CPS1P31327 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CPS1P31327 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPS1P31327 AL929302.1-201ENST00000426556 871 ntBASIC20.73■□□□□ 0.91
CPS1P31327 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPS1P31327 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC20.73■□□□□ 0.91
CPS1P31327 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPS1P31327 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPS1P31327 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPS1P31327 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CPS1P31327 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPS1P31327 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPS1P31327 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC20.72■□□□□ 0.91
CPS1P31327 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPS1P31327 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPS1P31327 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPS1P31327 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPS1P31327 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPS1P31327 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPS1P31327 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPS1P31327 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC20.72■□□□□ 0.91
CPS1P31327 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC20.72■□□□□ 0.91
CPS1P31327 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC20.72■□□□□ 0.91
CPS1P31327 CSNK1G2P1-201ENST00000442675 955 ntBASIC20.72■□□□□ 0.91
CPS1P31327 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPS1P31327 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC20.72■□□□□ 0.91
CPS1P31327 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC20.72■□□□□ 0.91
CPS1P31327 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC20.72■□□□□ 0.91
CPS1P31327 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC20.72■□□□□ 0.91
CPS1P31327 AC226150.1-201ENST00000544259 466 ntBASIC20.72■□□□□ 0.91
CPS1P31327 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC20.72■□□□□ 0.91
CPS1P31327 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC20.72■□□□□ 0.91
CPS1P31327 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC20.72■□□□□ 0.91
CPS1P31327 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CPS1P31327 AL391005.1-201ENST00000623953 2435 ntBASIC20.72■□□□□ 0.91
CPS1P31327 MROH4P-201ENST00000431302 1578 ntBASIC20.72■□□□□ 0.91
CPS1P31327 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC20.72■□□□□ 0.91
CPS1P31327 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CPS1P31327 AHCYP4-201ENST00000419201 1315 ntBASIC20.72■□□□□ 0.91
CPS1P31327 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC20.72■□□□□ 0.91
CPS1P31327 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPS1P31327 KRT8P28-201ENST00000433288 1390 ntBASIC20.72■□□□□ 0.91
CPS1P31327 WASH7P-201ENST00000488147 1351 ntBASIC20.72■□□□□ 0.91
CPS1P31327 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CPS1P31327 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC20.71■□□□□ 0.91
CPS1P31327 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC20.71■□□□□ 0.91
CPS1P31327 AC007292.2-201ENST00000593524 1812 ntBASIC20.71■□□□□ 0.91
CPS1P31327 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPS1P31327 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CPS1P31327 AC087481.3-201ENST00000602886 1894 ntBASIC20.71■□□□□ 0.91
CPS1P31327 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPS1P31327 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPS1P31327 AC112693.3-201ENST00000624819 1983 ntBASIC20.71■□□□□ 0.91
CPS1P31327 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC20.71■□□□□ 0.91
CPS1P31327 AC108734.2-201ENST00000420887 1069 ntBASIC20.71■□□□□ 0.91
CPS1P31327 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC20.71■□□□□ 0.91
CPS1P31327 RHEB-207ENST00000496004 744 ntTSL 2 BASIC20.71■□□□□ 0.91
CPS1P31327 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC20.71■□□□□ 0.91
CPS1P31327 DUT-207ENST00000559416 635 ntTSL 2 BASIC20.71■□□□□ 0.91
CPS1P31327 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC20.71■□□□□ 0.91
CPS1P31327 AC007250.1-201ENST00000608934 338 ntBASIC20.71■□□□□ 0.91
CPS1P31327 AL118522.1-201ENST00000611368 560 ntBASIC20.71■□□□□ 0.91
CPS1P31327 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPS1P31327 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPS1P31327 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPS1P31327 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CPS1P31327 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC20.71■□□□□ 0.91
CPS1P31327 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPS1P31327 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPS1P31327 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPS1P31327 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CPS1P31327 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.7■□□□□ 0.9
CPS1P31327 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms