Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
ABCD3P28288 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ABCD3P28288 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.96□□□□□ -0.17
ABCD3P28288 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.96□□□□□ -0.17
ABCD3P28288 RN7SL48P-201ENST00000579283 293 ntBASIC13.96□□□□□ -0.17
ABCD3P28288 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ABCD3P28288 AL512343.1-201ENST00000605837 169 ntBASIC13.96□□□□□ -0.17
ABCD3P28288 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.96□□□□□ -0.17
ABCD3P28288 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.96□□□□□ -0.17
ABCD3P28288 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
ABCD3P28288 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.96□□□□□ -0.17
ABCD3P28288 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCD3P28288 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.96□□□□□ -0.17
ABCD3P28288 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.96□□□□□ -0.17
ABCD3P28288 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ABCD3P28288 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
ABCD3P28288 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
ABCD3P28288 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ABCD3P28288 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
ABCD3P28288 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ABCD3P28288 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ABCD3P28288 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ABCD3P28288 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ABCD3P28288 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ABCD3P28288 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ABCD3P28288 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ABCD3P28288 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ABCD3P28288 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
ABCD3P28288 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.95□□□□□ -0.18
ABCD3P28288 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.95□□□□□ -0.18
ABCD3P28288 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ABCD3P28288 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ABCD3P28288 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.95□□□□□ -0.18
ABCD3P28288 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.95□□□□□ -0.18
ABCD3P28288 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.95□□□□□ -0.18
ABCD3P28288 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
ABCD3P28288 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.95□□□□□ -0.18
ABCD3P28288 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.95□□□□□ -0.18
ABCD3P28288 ACA64.2-201ENST00000459014 129 ntBASIC13.95□□□□□ -0.18
ABCD3P28288 AC026434.2-201ENST00000506094 1078 ntBASIC13.95□□□□□ -0.18
ABCD3P28288 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
ABCD3P28288 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.95□□□□□ -0.18
ABCD3P28288 HILS1-202ENST00000545329 423 ntBASIC13.95□□□□□ -0.18
ABCD3P28288 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.95□□□□□ -0.18
ABCD3P28288 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.95□□□□□ -0.18
ABCD3P28288 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.95□□□□□ -0.18
ABCD3P28288 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 AC244669.2-201ENST00000612320 853 ntBASIC13.95□□□□□ -0.18
ABCD3P28288 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 AC132938.4-201ENST00000623835 848 ntBASIC13.95□□□□□ -0.18
ABCD3P28288 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.95□□□□□ -0.18
ABCD3P28288 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.95□□□□□ -0.18
ABCD3P28288 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.95□□□□□ -0.18
ABCD3P28288 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.95□□□□□ -0.18
ABCD3P28288 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
ABCD3P28288 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.95□□□□□ -0.18
ABCD3P28288 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
ABCD3P28288 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ABCD3P28288 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ABCD3P28288 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 PDIA3P1-201ENST00000471856 1510 ntBASIC13.95□□□□□ -0.18
ABCD3P28288 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ABCD3P28288 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCD3P28288 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCD3P28288 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCD3P28288 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
ABCD3P28288 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
ABCD3P28288 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
ABCD3P28288 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ABCD3P28288 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCD3P28288 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ABCD3P28288 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ABCD3P28288 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCD3P28288 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCD3P28288 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCD3P28288 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.94□□□□□ -0.18
ABCD3P28288 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms