Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
GDF1P27539 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
GDF1P27539 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
GDF1P27539 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.72□□□□□ -0.21
GDF1P27539 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.72□□□□□ -0.21
GDF1P27539 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
GDF1P27539 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
GDF1P27539 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.72□□□□□ -0.21
GDF1P27539 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
GDF1P27539 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GDF1P27539 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.72□□□□□ -0.21
GDF1P27539 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
GDF1P27539 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
GDF1P27539 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 WASH3P-207ENST00000560956 1394 ntBASIC13.71□□□□□ -0.21
GDF1P27539 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.71□□□□□ -0.21
GDF1P27539 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
GDF1P27539 PPT1-215ENST00000641471 2368 ntBASIC13.71□□□□□ -0.21
GDF1P27539 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.71□□□□□ -0.21
GDF1P27539 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.71□□□□□ -0.21
GDF1P27539 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.71□□□□□ -0.21
GDF1P27539 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
GDF1P27539 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
GDF1P27539 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
GDF1P27539 POM121L8P-201ENST00000417732 1281 ntBASIC13.71□□□□□ -0.21
GDF1P27539 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.71□□□□□ -0.21
GDF1P27539 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 POM121L9P-203ENST00000441984 1285 ntBASIC13.71□□□□□ -0.21
GDF1P27539 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.71□□□□□ -0.21
GDF1P27539 AC026434.2-201ENST00000506094 1078 ntBASIC13.71□□□□□ -0.21
GDF1P27539 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.71□□□□□ -0.21
GDF1P27539 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.71□□□□□ -0.21
GDF1P27539 MIR4741-201ENST00000579822 90 ntBASIC13.71□□□□□ -0.21
GDF1P27539 AP000845.1-201ENST00000581677 2131 ntBASIC13.71□□□□□ -0.21
GDF1P27539 OR10B1P-201ENST00000601666 907 ntBASIC13.71□□□□□ -0.21
GDF1P27539 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.71□□□□□ -0.21
GDF1P27539 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.71□□□□□ -0.21
GDF1P27539 MIR6799-201ENST00000620297 69 ntBASIC13.71□□□□□ -0.21
GDF1P27539 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.71□□□□□ -0.21
GDF1P27539 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GDF1P27539 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.71□□□□□ -0.21
GDF1P27539 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
GDF1P27539 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
GDF1P27539 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GDF1P27539 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.71□□□□□ -0.22
GDF1P27539 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GDF1P27539 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.71□□□□□ -0.22
GDF1P27539 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.71□□□□□ -0.22
GDF1P27539 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
GDF1P27539 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
GDF1P27539 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.71□□□□□ -0.22
GDF1P27539 AC138035.3-201ENST00000622706 2791 ntBASIC13.71□□□□□ -0.22
GDF1P27539 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.71□□□□□ -0.22
GDF1P27539 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
GDF1P27539 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GDF1P27539 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GDF1P27539 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.71□□□□□ -0.22
GDF1P27539 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 CICP6-201ENST00000457191 2729 ntBASIC13.7□□□□□ -0.22
GDF1P27539 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
GDF1P27539 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
GDF1P27539 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.7□□□□□ -0.22
GDF1P27539 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
GDF1P27539 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
GDF1P27539 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.7□□□□□ -0.22
GDF1P27539 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.7□□□□□ -0.22
GDF1P27539 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms