Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD40P25942 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD40P25942 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.02□□□□□ -0.32
CD40P25942 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CD40P25942 AL023775.1-201ENST00000454907 1746 ntBASIC13.02□□□□□ -0.32
CD40P25942 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.02□□□□□ -0.32
CD40P25942 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD40P25942 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CD40P25942 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD40P25942 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD40P25942 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.02□□□□□ -0.32
CD40P25942 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD40P25942 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD40P25942 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CD40P25942 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.02□□□□□ -0.33
CD40P25942 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CD40P25942 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 AC079178.1-201ENST00000420915 656 ntBASIC13.02□□□□□ -0.33
CD40P25942 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.02□□□□□ -0.33
CD40P25942 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.02□□□□□ -0.33
CD40P25942 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.02□□□□□ -0.33
CD40P25942 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CD40P25942 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 AP003171.2-201ENST00000528208 925 ntBASIC13.02□□□□□ -0.33
CD40P25942 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.02□□□□□ -0.33
CD40P25942 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.02□□□□□ -0.33
CD40P25942 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.02□□□□□ -0.33
CD40P25942 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.02□□□□□ -0.33
CD40P25942 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.02□□□□□ -0.33
CD40P25942 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CD40P25942 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.02□□□□□ -0.33
CD40P25942 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.02□□□□□ -0.33
CD40P25942 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 KRT8P4-201ENST00000509735 1454 ntBASIC13.02□□□□□ -0.33
CD40P25942 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.02□□□□□ -0.33
CD40P25942 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CD40P25942 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.02□□□□□ -0.33
CD40P25942 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 AL162727.3-201ENST00000635661 2787 ntBASIC13.02□□□□□ -0.33
CD40P25942 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.02□□□□□ -0.33
CD40P25942 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40P25942 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CD40P25942 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.01□□□□□ -0.33
CD40P25942 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CD40P25942 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.01□□□□□ -0.33
CD40P25942 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CD40P25942 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
CD40P25942 AC007969.1-201ENST00000433675 447 ntBASIC13.01□□□□□ -0.33
CD40P25942 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 RPSAP36-202ENST00000494591 1261 ntBASIC13.01□□□□□ -0.33
CD40P25942 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.01□□□□□ -0.33
CD40P25942 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
CD40P25942 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.01□□□□□ -0.33
CD40P25942 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40P25942 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.01□□□□□ -0.33
CD40P25942 AC244157.2-201ENST00000616239 1006 ntBASIC13.01□□□□□ -0.33
CD40P25942 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.01□□□□□ -0.33
CD40P25942 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CD40P25942 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CD40P25942 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40P25942 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms