Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ERCC2P18074 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.57■□□□□ 0.08
ERCC2P18074 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.57■□□□□ 0.08
ERCC2P18074 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.57■□□□□ 0.08
ERCC2P18074 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
ERCC2P18074 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
ERCC2P18074 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ERCC2P18074 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ERCC2P18074 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.56■□□□□ 0.08
ERCC2P18074 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.56■□□□□ 0.08
ERCC2P18074 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ERCC2P18074 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.56■□□□□ 0.08
ERCC2P18074 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.56■□□□□ 0.08
ERCC2P18074 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.56■□□□□ 0.08
ERCC2P18074 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ERCC2P18074 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.56■□□□□ 0.08
ERCC2P18074 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.56■□□□□ 0.08
ERCC2P18074 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.56■□□□□ 0.08
ERCC2P18074 TMEM14DP-201ENST00000422205 345 ntBASIC15.56■□□□□ 0.08
ERCC2P18074 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.56■□□□□ 0.08
ERCC2P18074 AC106760.1-201ENST00000508690 800 ntBASIC15.56■□□□□ 0.08
ERCC2P18074 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.56■□□□□ 0.08
ERCC2P18074 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.56■□□□□ 0.08
ERCC2P18074 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
ERCC2P18074 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.56■□□□□ 0.08
ERCC2P18074 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.56■□□□□ 0.08
ERCC2P18074 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
ERCC2P18074 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.56■□□□□ 0.08
ERCC2P18074 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ERCC2P18074 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.56■□□□□ 0.08
ERCC2P18074 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.56■□□□□ 0.08
ERCC2P18074 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.56■□□□□ 0.08
ERCC2P18074 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC2P18074 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC2P18074 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC2P18074 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC2P18074 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC2P18074 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC2P18074 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC2P18074 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
ERCC2P18074 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC2P18074 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ERCC2P18074 MTHFR-210ENST00000641407 2387 ntBASIC15.55■□□□□ 0.08
ERCC2P18074 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC2P18074 AL390755.1-201ENST00000623716 2027 ntBASIC15.55■□□□□ 0.08
ERCC2P18074 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
ERCC2P18074 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC2P18074 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.55■□□□□ 0.08
ERCC2P18074 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC2P18074 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC2P18074 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC2P18074 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC2P18074 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC2P18074 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.55■□□□□ 0.08
ERCC2P18074 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ERCC2P18074 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
ERCC2P18074 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC2P18074 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.55■□□□□ 0.08
ERCC2P18074 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC2P18074 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC2P18074 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC2P18074 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC2P18074 TTTY23B-201ENST00000442790 549 ntBASIC15.55■□□□□ 0.08
ERCC2P18074 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.55■□□□□ 0.08
ERCC2P18074 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms