Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL11A1P12107 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL11A1P12107 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
COL11A1P12107 AC098935.1-201ENST00000446057 611 ntBASIC16.77■□□□□ 0.28
COL11A1P12107 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.77■□□□□ 0.28
COL11A1P12107 AL035414.1-201ENST00000451327 857 ntBASIC16.77■□□□□ 0.28
COL11A1P12107 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL11A1P12107 MRPL22P1-201ENST00000505398 616 ntBASIC16.77■□□□□ 0.28
COL11A1P12107 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.77■□□□□ 0.28
COL11A1P12107 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
COL11A1P12107 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.77■□□□□ 0.28
COL11A1P12107 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.77■□□□□ 0.28
COL11A1P12107 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
COL11A1P12107 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.77■□□□□ 0.28
COL11A1P12107 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL11A1P12107 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL11A1P12107 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
COL11A1P12107 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
COL11A1P12107 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL11A1P12107 FAM90A2P-201ENST00000511144 1395 ntBASIC16.77■□□□□ 0.28
COL11A1P12107 FAM90A25P-201ENST00000528404 1395 ntBASIC16.77■□□□□ 0.28
COL11A1P12107 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.77■□□□□ 0.28
COL11A1P12107 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.77■□□□□ 0.28
COL11A1P12107 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL11A1P12107 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL11A1P12107 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL11A1P12107 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.77■□□□□ 0.28
COL11A1P12107 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL11A1P12107 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
COL11A1P12107 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.77■□□□□ 0.27
COL11A1P12107 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.77■□□□□ 0.27
COL11A1P12107 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.77■□□□□ 0.27
COL11A1P12107 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.77■□□□□ 0.27
COL11A1P12107 AC239868.1-201ENST00000369385 493 ntBASIC16.77■□□□□ 0.27
COL11A1P12107 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL11A1P12107 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.77■□□□□ 0.27
COL11A1P12107 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.77■□□□□ 0.27
COL11A1P12107 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.77■□□□□ 0.27
COL11A1P12107 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
COL11A1P12107 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.77■□□□□ 0.27
COL11A1P12107 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.77■□□□□ 0.27
COL11A1P12107 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.77■□□□□ 0.27
COL11A1P12107 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.77■□□□□ 0.27
COL11A1P12107 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.77■□□□□ 0.27
COL11A1P12107 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COL11A1P12107 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COL11A1P12107 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COL11A1P12107 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL11A1P12107 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COL11A1P12107 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.77■□□□□ 0.27
COL11A1P12107 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.77■□□□□ 0.27
COL11A1P12107 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.76■□□□□ 0.27
COL11A1P12107 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
COL11A1P12107 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.76■□□□□ 0.27
COL11A1P12107 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
COL11A1P12107 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.76■□□□□ 0.27
COL11A1P12107 AC006486.2-201ENST00000624246 2199 ntBASIC16.76■□□□□ 0.27
COL11A1P12107 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
COL11A1P12107 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
COL11A1P12107 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.76■□□□□ 0.27
COL11A1P12107 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.76■□□□□ 0.27
COL11A1P12107 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
COL11A1P12107 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.76■□□□□ 0.27
COL11A1P12107 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 RN7SL81P-201ENST00000493781 261 ntBASIC16.76■□□□□ 0.27
COL11A1P12107 POU5F1P2-201ENST00000521750 823 ntBASIC16.76■□□□□ 0.27
COL11A1P12107 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.76■□□□□ 0.27
COL11A1P12107 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.76■□□□□ 0.27
COL11A1P12107 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COL11A1P12107 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.76■□□□□ 0.27
COL11A1P12107 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.76■□□□□ 0.27
COL11A1P12107 AL805961.1-201ENST00000642026 753 ntBASIC16.76■□□□□ 0.27
COL11A1P12107 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
COL11A1P12107 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
COL11A1P12107 AC073347.1-201ENST00000421633 2643 ntBASIC16.76■□□□□ 0.27
COL11A1P12107 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.76■□□□□ 0.27
COL11A1P12107 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL11A1P12107 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.76■□□□□ 0.27
COL11A1P12107 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.76■□□□□ 0.27
COL11A1P12107 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COL11A1P12107 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COL11A1P12107 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms