Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SP9P0CG40 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SP9P0CG40 AL359258.3-201ENST00000622910 2331 ntBASIC14.58□□□□□ -0.08
SP9P0CG40 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SP9P0CG40 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.58□□□□□ -0.08
SP9P0CG40 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.57□□□□□ -0.08
SP9P0CG40 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SP9P0CG40 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.57□□□□□ -0.08
SP9P0CG40 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.57□□□□□ -0.08
SP9P0CG40 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.57□□□□□ -0.08
SP9P0CG40 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 AP003680.1-201ENST00000598970 3660 ntBASIC14.57□□□□□ -0.08
SP9P0CG40 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.57□□□□□ -0.08
SP9P0CG40 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SP9P0CG40 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.57□□□□□ -0.08
SP9P0CG40 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.57□□□□□ -0.08
SP9P0CG40 AC073869.2-201ENST00000417338 1026 ntBASIC14.57□□□□□ -0.08
SP9P0CG40 ACTG1P19-201ENST00000418987 1116 ntBASIC14.57□□□□□ -0.08
SP9P0CG40 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.57□□□□□ -0.08
SP9P0CG40 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.57□□□□□ -0.08
SP9P0CG40 BRI3P1-201ENST00000440440 378 ntBASIC14.57□□□□□ -0.08
SP9P0CG40 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC14.57□□□□□ -0.08
SP9P0CG40 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.57□□□□□ -0.08
SP9P0CG40 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC14.57□□□□□ -0.08
SP9P0CG40 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 RN7SL23P-201ENST00000484055 275 ntBASIC14.57□□□□□ -0.08
SP9P0CG40 CISD2-202ENST00000503643 808 ntTSL 2 BASIC14.57□□□□□ -0.08
SP9P0CG40 OR5BD1P-201ENST00000532527 817 ntBASIC14.57□□□□□ -0.08
SP9P0CG40 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.57□□□□□ -0.08
SP9P0CG40 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.57□□□□□ -0.08
SP9P0CG40 MIR5001-201ENST00000580185 100 ntBASIC14.57□□□□□ -0.08
SP9P0CG40 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.57□□□□□ -0.08
SP9P0CG40 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
SP9P0CG40 MIR6816-201ENST00000620368 66 ntBASIC14.57□□□□□ -0.08
SP9P0CG40 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.57□□□□□ -0.08
SP9P0CG40 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.57□□□□□ -0.08
SP9P0CG40 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SP9P0CG40 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.57□□□□□ -0.08
SP9P0CG40 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 AC092364.2-201ENST00000596710 2692 ntBASIC14.57□□□□□ -0.08
SP9P0CG40 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SP9P0CG40 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SP9P0CG40 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.57□□□□□ -0.08
SP9P0CG40 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SP9P0CG40 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SP9P0CG40 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
SP9P0CG40 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.56□□□□□ -0.08
SP9P0CG40 AGGF1P2-201ENST00000426656 2106 ntBASIC14.56□□□□□ -0.08
SP9P0CG40 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
SP9P0CG40 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.56□□□□□ -0.08
SP9P0CG40 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.56□□□□□ -0.08
SP9P0CG40 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.56□□□□□ -0.08
SP9P0CG40 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SP9P0CG40 AC063952.3-201ENST00000467756 308 ntBASIC14.56□□□□□ -0.08
SP9P0CG40 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.56□□□□□ -0.08
SP9P0CG40 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SP9P0CG40 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.56□□□□□ -0.08
SP9P0CG40 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.56□□□□□ -0.08
SP9P0CG40 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC14.56□□□□□ -0.08
SP9P0CG40 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.56□□□□□ -0.08
SP9P0CG40 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.56□□□□□ -0.08
SP9P0CG40 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.56□□□□□ -0.08
SP9P0CG40 AC021016.3-201ENST00000608367 477 ntBASIC14.56□□□□□ -0.08
SP9P0CG40 AC112504.1-201ENST00000623415 1841 ntBASIC14.56□□□□□ -0.08
SP9P0CG40 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.56□□□□□ -0.08
SP9P0CG40 ENPP7P8-202ENST00000527856 1345 ntBASIC14.56□□□□□ -0.08
SP9P0CG40 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms