Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.72□□□□□ -0.53
TRBV12-3P01733 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRBV12-3P01733 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 CICP24-201ENST00000605464 2705 ntBASIC11.71□□□□□ -0.53
TRBV12-3P01733 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 LSM5-207ENST00000410044 687 ntTSL 3 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 AC026434.2-201ENST00000506094 1078 ntBASIC11.71□□□□□ -0.53
TRBV12-3P01733 AC022616.1-201ENST00000518688 554 ntBASIC11.71□□□□□ -0.53
TRBV12-3P01733 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 BTNL10-201ENST00000595971 695 ntBASIC11.71□□□□□ -0.53
TRBV12-3P01733 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRBV12-3P01733 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
TRBV12-3P01733 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
TRBV12-3P01733 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
TRBV12-3P01733 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.71□□□□□ -0.54
TRBV12-3P01733 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.71□□□□□ -0.54
TRBV12-3P01733 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
TRBV12-3P01733 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.71□□□□□ -0.54
TRBV12-3P01733 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
TRBV12-3P01733 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRBV12-3P01733 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.71□□□□□ -0.54
TRBV12-3P01733 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TRBV12-3P01733 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRBV12-3P01733 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
TRBV12-3P01733 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
TRBV12-3P01733 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRBV12-3P01733 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TRBV12-3P01733 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRBV12-3P01733 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRBV12-3P01733 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 AC063926.2-201ENST00000623766 1308 ntBASIC11.7□□□□□ -0.54
TRBV12-3P01733 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRBV12-3P01733 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 AC005229.1-201ENST00000392885 409 ntBASIC11.7□□□□□ -0.54
TRBV12-3P01733 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 U91328.1-201ENST00000437528 223 ntBASIC11.7□□□□□ -0.54
TRBV12-3P01733 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.7□□□□□ -0.54
TRBV12-3P01733 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms