Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
SIX6O95475 KRT8P22-201ENST00000562317 1415 ntBASIC12.72□□□□□ -0.37
SIX6O95475 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SIX6O95475 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.72□□□□□ -0.37
SIX6O95475 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.72□□□□□ -0.37
SIX6O95475 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.72□□□□□ -0.37
SIX6O95475 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.72□□□□□ -0.37
SIX6O95475 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.72□□□□□ -0.37
SIX6O95475 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 AL031133.1-201ENST00000406807 723 ntBASIC12.72□□□□□ -0.37
SIX6O95475 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SIX6O95475 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.72□□□□□ -0.37
SIX6O95475 AC021087.4-201ENST00000563761 564 ntBASIC12.72□□□□□ -0.37
SIX6O95475 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.72□□□□□ -0.37
SIX6O95475 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.72□□□□□ -0.37
SIX6O95475 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.72□□□□□ -0.37
SIX6O95475 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.72□□□□□ -0.37
SIX6O95475 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 AL354702.1-201ENST00000442006 1960 ntBASIC12.72□□□□□ -0.37
SIX6O95475 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.72□□□□□ -0.37
SIX6O95475 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.72□□□□□ -0.37
SIX6O95475 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.72□□□□□ -0.37
SIX6O95475 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SIX6O95475 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.72□□□□□ -0.37
SIX6O95475 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.72□□□□□ -0.37
SIX6O95475 AC012508.2-201ENST00000567613 1472 ntBASIC12.72□□□□□ -0.37
SIX6O95475 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SIX6O95475 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.72□□□□□ -0.37
SIX6O95475 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SIX6O95475 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SIX6O95475 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SIX6O95475 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
SIX6O95475 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SIX6O95475 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SIX6O95475 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SIX6O95475 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SIX6O95475 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SIX6O95475 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
SIX6O95475 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.71□□□□□ -0.37
SIX6O95475 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SIX6O95475 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SIX6O95475 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SIX6O95475 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SIX6O95475 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.71□□□□□ -0.37
SIX6O95475 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SIX6O95475 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.71□□□□□ -0.37
SIX6O95475 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.71□□□□□ -0.37
SIX6O95475 FAM86EP-206ENST00000510506 987 ntBASIC12.71□□□□□ -0.37
SIX6O95475 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.71□□□□□ -0.37
SIX6O95475 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.71□□□□□ -0.37
SIX6O95475 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.37
SIX6O95475 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
SIX6O95475 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.71□□□□□ -0.37
SIX6O95475 AC024267.1-201ENST00000582320 895 ntBASIC12.71□□□□□ -0.37
SIX6O95475 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.71□□□□□ -0.37
SIX6O95475 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.71□□□□□ -0.37
SIX6O95475 AC008608.2-201ENST00000606089 416 ntBASIC12.71□□□□□ -0.37
SIX6O95475 AC116407.4-201ENST00000623319 1061 ntBASIC12.71□□□□□ -0.37
SIX6O95475 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SIX6O95475 INE2-201ENST00000630399 1874 ntBASIC12.71□□□□□ -0.37
SIX6O95475 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.71□□□□□ -0.37
SIX6O95475 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.38
SIX6O95475 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SIX6O95475 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SIX6O95475 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SIX6O95475 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SIX6O95475 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SIX6O95475 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.71□□□□□ -0.38
SIX6O95475 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.71□□□□□ -0.38
SIX6O95475 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SIX6O95475 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.71□□□□□ -0.38
SIX6O95475 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.71□□□□□ -0.38
SIX6O95475 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SIX6O95475 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SIX6O95475 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms