Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 AC005521.1-201ENST00000393351 872 ntBASIC13.19□□□□□ -0.3
UPK1BO75841 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.19□□□□□ -0.3
UPK1BO75841 EEF1DP4-201ENST00000446006 880 ntBASIC13.19□□□□□ -0.3
UPK1BO75841 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
UPK1BO75841 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
UPK1BO75841 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.19□□□□□ -0.3
UPK1BO75841 AP001269.4-201ENST00000609611 512 ntBASIC13.19□□□□□ -0.3
UPK1BO75841 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.19□□□□□ -0.3
UPK1BO75841 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.19□□□□□ -0.3
UPK1BO75841 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UPK1BO75841 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.19□□□□□ -0.3
UPK1BO75841 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
UPK1BO75841 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UPK1BO75841 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UPK1BO75841 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UPK1BO75841 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK1BO75841 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK1BO75841 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UPK1BO75841 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 AC107375.1-201ENST00000564464 2231 ntBASIC13.19□□□□□ -0.3
UPK1BO75841 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UPK1BO75841 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
UPK1BO75841 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UPK1BO75841 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
UPK1BO75841 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.18□□□□□ -0.3
UPK1BO75841 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.18□□□□□ -0.3
UPK1BO75841 MKRN5P-201ENST00000445263 1467 ntBASIC13.18□□□□□ -0.3
UPK1BO75841 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.18□□□□□ -0.3
UPK1BO75841 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
UPK1BO75841 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK1BO75841 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
UPK1BO75841 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 AL031719.1-201ENST00000623365 2587 ntBASIC13.18□□□□□ -0.3
UPK1BO75841 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.18□□□□□ -0.3
UPK1BO75841 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
UPK1BO75841 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.18□□□□□ -0.3
UPK1BO75841 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.18□□□□□ -0.3
UPK1BO75841 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.18□□□□□ -0.3
UPK1BO75841 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.18□□□□□ -0.3
UPK1BO75841 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 AC136604.1-201ENST00000418535 575 ntBASIC13.18□□□□□ -0.3
UPK1BO75841 IGHV3-47-201ENST00000425060 335 ntBASIC13.18□□□□□ -0.3
UPK1BO75841 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.18□□□□□ -0.3
UPK1BO75841 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK1BO75841 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
UPK1BO75841 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UPK1BO75841 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 AC061975.2-201ENST00000581722 295 ntBASIC13.18□□□□□ -0.3
UPK1BO75841 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.18□□□□□ -0.3
UPK1BO75841 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.18□□□□□ -0.3
UPK1BO75841 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.18□□□□□ -0.3
UPK1BO75841 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.18□□□□□ -0.3
UPK1BO75841 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK1BO75841 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.18□□□□□ -0.3
UPK1BO75841 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 AL136982.4-201ENST00000437689 1740 ntBASIC13.18□□□□□ -0.3
UPK1BO75841 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK1BO75841 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.18□□□□□ -0.3
UPK1BO75841 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK1BO75841 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
UPK1BO75841 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UPK1BO75841 AC135782.3-201ENST00000562782 2105 ntBASIC13.18□□□□□ -0.3
UPK1BO75841 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK1BO75841 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK1BO75841 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK1BO75841 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK1BO75841 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
UPK1BO75841 AC024075.2-201ENST00000598112 1473 ntBASIC13.17□□□□□ -0.3
UPK1BO75841 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK1BO75841 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms