Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MEP1AP4-201ENST00000423244 1087 ntBASIC13.19□□□□□ -0.3
PHF1O43189 KRT43P-201ENST00000434019 910 ntBASIC13.19□□□□□ -0.3
PHF1O43189 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.19□□□□□ -0.3
PHF1O43189 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 ELK1P1-201ENST00000485699 580 ntBASIC13.19□□□□□ -0.3
PHF1O43189 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.19□□□□□ -0.3
PHF1O43189 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.19□□□□□ -0.3
PHF1O43189 AC123567.1-201ENST00000548294 1261 ntBASIC13.19□□□□□ -0.3
PHF1O43189 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.19□□□□□ -0.3
PHF1O43189 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.19□□□□□ -0.3
PHF1O43189 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.19□□□□□ -0.3
PHF1O43189 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.19□□□□□ -0.3
PHF1O43189 AC008735.3-201ENST00000596646 500 ntBASIC13.19□□□□□ -0.3
PHF1O43189 AC244093.1-201ENST00000610837 814 ntBASIC13.19□□□□□ -0.3
PHF1O43189 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.19□□□□□ -0.3
PHF1O43189 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
PHF1O43189 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.19□□□□□ -0.3
PHF1O43189 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
PHF1O43189 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 AC013726.1-201ENST00000563747 2285 ntBASIC13.19□□□□□ -0.3
PHF1O43189 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
PHF1O43189 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
PHF1O43189 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
PHF1O43189 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
PHF1O43189 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PHF1O43189 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PHF1O43189 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.18□□□□□ -0.3
PHF1O43189 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
PHF1O43189 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
PHF1O43189 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.18□□□□□ -0.3
PHF1O43189 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.18□□□□□ -0.3
PHF1O43189 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PHF1O43189 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
PHF1O43189 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.18□□□□□ -0.3
PHF1O43189 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PHF1O43189 ELK2AP-201ENST00000392510 1007 ntBASIC13.18□□□□□ -0.3
PHF1O43189 MIR1908-201ENST00000410394 80 ntBASIC13.18□□□□□ -0.3
PHF1O43189 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.18□□□□□ -0.3
PHF1O43189 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.18□□□□□ -0.3
PHF1O43189 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.18□□□□□ -0.3
PHF1O43189 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.18□□□□□ -0.3
PHF1O43189 EEF1DP4-201ENST00000446006 880 ntBASIC13.18□□□□□ -0.3
PHF1O43189 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PHF1O43189 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.18□□□□□ -0.3
PHF1O43189 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
PHF1O43189 AC023310.3-201ENST00000557027 670 ntBASIC13.18□□□□□ -0.3
PHF1O43189 AC100756.1-201ENST00000562736 682 ntBASIC13.18□□□□□ -0.3
PHF1O43189 AC138749.3-201ENST00000567691 622 ntBASIC13.18□□□□□ -0.3
PHF1O43189 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.18□□□□□ -0.3
PHF1O43189 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.18□□□□□ -0.3
PHF1O43189 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PHF1O43189 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.18□□□□□ -0.3
PHF1O43189 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.18□□□□□ -0.3
PHF1O43189 LINC01115-203ENST00000606068 577 ntBASIC13.18□□□□□ -0.3
PHF1O43189 AC116165.1-201ENST00000611806 668 ntBASIC13.18□□□□□ -0.3
PHF1O43189 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.18□□□□□ -0.3
PHF1O43189 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.18□□□□□ -0.3
PHF1O43189 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
PHF1O43189 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PHF1O43189 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 AC126335.2-201ENST00000623362 4637 ntBASIC13.18□□□□□ -0.3
PHF1O43189 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.18□□□□□ -0.3
PHF1O43189 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PHF1O43189 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.18□□□□□ -0.3
PHF1O43189 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
PHF1O43189 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PHF1O43189 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PHF1O43189 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.17□□□□□ -0.3
PHF1O43189 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms