Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 AC023310.1-201ENST00000554836 735 ntBASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 AC011840.2-201ENST00000563063 1520 ntBASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.72■□□□□ 0.11
YJEFN3A6XGL0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 AC003102.2-201ENST00000589195 1469 ntBASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 AL138725.1-201ENST00000407347 1314 ntBASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 RPS2P32-201ENST00000439199 892 ntBASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 COX5BP1-201ENST00000507622 393 ntBASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 C2orf69P2-201ENST00000562032 1123 ntBASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 AC073413.1-201ENST00000603927 732 ntBASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 AC138696.2-201ENST00000607376 223 ntBASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 NORAD-201ENST00000565493 5339 ntBASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
YJEFN3A6XGL0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
YJEFN3A6XGL0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
YJEFN3A6XGL0 AC018529.2-202ENST00000611482 3087 ntBASIC15.71■□□□□ 0.1
YJEFN3A6XGL0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
YJEFN3A6XGL0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
YJEFN3A6XGL0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
YJEFN3A6XGL0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
YJEFN3A6XGL0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
YJEFN3A6XGL0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.7■□□□□ 0.1
YJEFN3A6XGL0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms