Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 AC106820.3-201ENST00000561653 397 ntBASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 PPY2P-201ENST00000582808 702 ntBASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 CYGB-203ENST00000589145 788 ntTSL 3 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 AC073413.1-201ENST00000603927 732 ntBASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 ABBA01031663.1-201ENST00000635630 790 ntBASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 AC015818.8-201ENST00000587907 1519 ntBASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 LILRP1-201ENST00000444199 1370 ntBASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 KRT8P4-201ENST00000509735 1454 ntBASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00588Q9Y4M8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 FKBP4P6-201ENST00000457486 1332 ntBASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 AC007969.1-201ENST00000433675 447 ntBASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC00588Q9Y4M8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms