Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PCDHA7Q9UN72 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA7Q9UN72 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHA7Q9UN72 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA7Q9UN72 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHA7Q9UN72 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHA7Q9UN72 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHA7Q9UN72 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA7Q9UN72 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHA7Q9UN72 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHA7Q9UN72 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHA7Q9UN72 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDHA7Q9UN72 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHA7Q9UN72 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHA7Q9UN72 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 AL512638.1-201ENST00000457493 794 ntBASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHA7Q9UN72 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 SPDYE22P-201ENST00000582158 798 ntBASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 AC005498.2-205ENST00000593218 784 ntBASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 AC106028.4-201ENST00000614509 607 ntBASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHA7Q9UN72 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms