Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC120045.2-201ENST00000567334 178 ntBASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 AC007431.3-201ENST00000623221 587 ntBASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 PRSS30P-206ENST00000641773 873 ntBASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 AC113367.3-201ENST00000508316 1912 ntBASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 AL442647.2-201ENST00000429864 857 ntBASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 SPTLC1P1-201ENST00000447199 261 ntBASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 AC093726.1-201ENST00000608064 963 ntBASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 MIR8072-201ENST00000614241 80 ntBASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS29Q9UBQ0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 AC018665.1-201ENST00000622927 1362 ntBASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 C1QBPP1-201ENST00000400117 770 ntBASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 DFFBP1-201ENST00000433250 979 ntBASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 UGT1A2P-201ENST00000454886 866 ntBASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.53□□□□□ -0.08
VPS29Q9UBQ0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms