Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 AL359258.3-201ENST00000622910 2331 ntBASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 BTBD6P1-201ENST00000412176 1267 ntBASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 AC091271.1-201ENST00000611877 1162 ntBASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 ZACNP1-201ENST00000612259 710 ntBASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 AL023775.1-201ENST00000454907 1746 ntBASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 AC079178.1-201ENST00000420915 656 ntBASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 AC007969.1-201ENST00000433675 447 ntBASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 AC022494.1-201ENST00000466044 728 ntBASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 RPSAP36-202ENST00000494591 1261 ntBASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 AP000845.1-201ENST00000581677 2131 ntBASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 PPY2P-201ENST00000582808 702 ntBASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 LILRP1-201ENST00000444199 1370 ntBASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLCF1Q9UBD9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms