Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13□□□□□ -0.33
GCM1Q9NP62 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13□□□□□ -0.33
GCM1Q9NP62 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
GCM1Q9NP62 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13□□□□□ -0.33
GCM1Q9NP62 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
GCM1Q9NP62 AP001063.1-201ENST00000568332 529 ntBASIC13□□□□□ -0.33
GCM1Q9NP62 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13□□□□□ -0.33
GCM1Q9NP62 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
GCM1Q9NP62 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13□□□□□ -0.33
GCM1Q9NP62 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13□□□□□ -0.33
GCM1Q9NP62 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13□□□□□ -0.33
GCM1Q9NP62 IGHV3-72-202ENST00000621503 303 ntBASIC13□□□□□ -0.33
GCM1Q9NP62 BX539320.1-201ENST00000623759 877 ntBASIC13□□□□□ -0.33
GCM1Q9NP62 AL035252.4-201ENST00000624174 288 ntBASIC13□□□□□ -0.33
GCM1Q9NP62 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13□□□□□ -0.33
GCM1Q9NP62 AC005252.2-201ENST00000624630 1141 ntBASIC13□□□□□ -0.33
GCM1Q9NP62 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GCM1Q9NP62 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
GCM1Q9NP62 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GCM1Q9NP62 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GCM1Q9NP62 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
GCM1Q9NP62 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
GCM1Q9NP62 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GCM1Q9NP62 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GCM1Q9NP62 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13□□□□□ -0.33
GCM1Q9NP62 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GCM1Q9NP62 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
GCM1Q9NP62 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GCM1Q9NP62 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 AC148477.4-201ENST00000613430 1793 ntBASIC12.99□□□□□ -0.33
GCM1Q9NP62 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 AC007787.1-201ENST00000588095 1583 ntBASIC12.99□□□□□ -0.33
GCM1Q9NP62 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 AC126177.1-201ENST00000547829 2218 ntBASIC12.99□□□□□ -0.33
GCM1Q9NP62 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 AC093525.8-201ENST00000624099 1342 ntBASIC12.99□□□□□ -0.33
GCM1Q9NP62 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 AC104457.1-201ENST00000401024 814 ntBASIC12.99□□□□□ -0.33
GCM1Q9NP62 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 GHSR-202ENST00000427970 912 ntBASIC12.99□□□□□ -0.33
GCM1Q9NP62 ACTG1P3-201ENST00000431775 1114 ntBASIC12.99□□□□□ -0.33
GCM1Q9NP62 TTTY23B-201ENST00000442790 549 ntBASIC12.99□□□□□ -0.33
GCM1Q9NP62 GIMAP3P-201ENST00000495150 836 ntBASIC12.99□□□□□ -0.33
GCM1Q9NP62 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 AC009486.1-201ENST00000569860 813 ntBASIC12.99□□□□□ -0.33
GCM1Q9NP62 SAMD11P1-201ENST00000571429 661 ntBASIC12.99□□□□□ -0.33
GCM1Q9NP62 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 CLUHP6-201ENST00000580789 941 ntBASIC12.99□□□□□ -0.33
GCM1Q9NP62 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.99□□□□□ -0.33
GCM1Q9NP62 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GCM1Q9NP62 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 AC023024.2-201ENST00000623561 1993 ntBASIC12.98□□□□□ -0.33
GCM1Q9NP62 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GCM1Q9NP62 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
GCM1Q9NP62 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms